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Protein
Submitted name:

Neuronal cell adhesion molecule short isoform

Gene

Nrcam

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Neuronal cell adhesion molecule short isoformImported
Gene namesi
Name:NrcamImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:104750. Nrcam.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei43 – 6422HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ6QRP1.
PeptideAtlasiQ6QRP1.

Expressioni

Gene expression databases

BgeeiENSMUSG00000020598.
GenevisibleiQ6QRP1. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000020939.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini65 – 15490Bravo_FIGEYInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3513. Eukaryota.
ENOG410XSVG. LUCA.
HOVERGENiHBG063178.
KOiK06756.

Family and domain databases

InterProiIPR026966. Neurofascin/L1/NrCAM_C.
[Graphical view]
PfamiPF13882. Bravo_FIGEY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6QRP1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGTAYKVRV GAEGDSGFVS SEDVFETGPA MASRQVDIAT QGWFIGLMCA
60 70 80 90 100
VALLILILLI VCFIRRNKGG KYPVKEKEDA HADPEIQPMK EDDGTFGEYS
110 120 130 140 150
DAEDHKPLKK GSRTPSDRTV KKEDSDDSLV DYGEGVNGQF NEDGSFIGQY
160 170
SGKKEKEPAE GNESSEAPSP VNAMNSFV
Length:178
Mass (Da):19,303
Last modified:July 5, 2004 - v1
Checksum:i505F0D8BEBDC1249
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY528242 mRNA. Translation: AAS48508.1.
RefSeqiNP_001139503.1. NM_001146031.1.
NP_795904.3. NM_176930.4.
UniGeneiMm.208439.

Genome annotation databases

GeneIDi319504.
KEGGimmu:319504.
UCSCiuc007nlz.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY528242 mRNA. Translation: AAS48508.1.
RefSeqiNP_001139503.1. NM_001146031.1.
NP_795904.3. NM_176930.4.
UniGeneiMm.208439.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000020939.

Proteomic databases

PaxDbiQ6QRP1.
PeptideAtlasiQ6QRP1.

Protocols and materials databases

DNASUi319504.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi319504.
KEGGimmu:319504.
UCSCiuc007nlz.2. mouse.

Organism-specific databases

CTDi4897.
MGIiMGI:104750. Nrcam.

Phylogenomic databases

eggNOGiKOG3513. Eukaryota.
ENOG410XSVG. LUCA.
HOVERGENiHBG063178.
KOiK06756.

Miscellaneous databases

ChiTaRSiNrcam. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000020598.
GenevisibleiQ6QRP1. MM.

Family and domain databases

InterProiIPR026966. Neurofascin/L1/NrCAM_C.
[Graphical view]
PfamiPF13882. Bravo_FIGEY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6QRP1_MOUSE
AccessioniPrimary (citable) accession number: Q6QRP1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.