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Q6QI09

- Q6QI09_RAT

UniProt

Q6QI09 - Q6QI09_RAT

Protein
Submitted name:

ATP synthase subunit gamma, mitochondrial

Gene

Taf3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 87 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. proton-transporting ATPase activity, rotational mechanism Source: InterPro
    2. proton-transporting ATP synthase activity, rotational mechanism Source: InterPro

    GO - Biological processi

    1. ATP synthesis coupled proton transport Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP synthase subunit gamma, mitochondrialImported
    Submitted name:
    LRRGT00199Imported
    Gene namesi
    Name:Taf3Imported
    Synonyms:Atp5c1Imported, LOC100360100Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 17

    Organism-specific databases

    RGDi620011. Atp5c1.
    2324594. Taf3.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial proton-transporting ATP synthase complex Source: Ensembl
    2. proton-transporting ATP synthase complex, catalytic core F(1) Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ6QI09.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000006837.
    HOGENOMiHOG000143453.
    OMAiGMCESYS.
    OrthoDBiEOG7QK0D3.

    Family and domain databases

    InterProiIPR000131. ATPase_F1-cplx_gsu.
    IPR023632. ATPase_F1_gsu_CS.
    IPR023633. ATPase_F1_gsu_dom.
    IPR006565. BTP.
    [Graphical view]
    PANTHERiPTHR11693. PTHR11693. 1 hit.
    PfamiPF00231. ATP-synt. 1 hit.
    PF07524. Bromo_TP. 1 hit.
    [Graphical view]
    PRINTSiPR00126. ATPASEGAMMA.
    SMARTiSM00576. BTP. 1 hit.
    [Graphical view]
    SUPFAMiSSF52943. SSF52943. 1 hit.
    TIGRFAMsiTIGR01146. ATPsyn_F1gamma. 1 hit.
    PROSITEiPS00153. ATPASE_GAMMA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6QI09-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATLKDITRR LKSIKNIQKI TKSMKMVAAA KYARAERELK PARVYGTGSL    50
    ALYEKAEIKG PEDKKKHLII GVSSDRGLCG AIHSSVAKQM KNDMAALTAA 100
    GKEVMIVGIG EKIKSILYRT HSDQFLVSFK DVGRKPPTFG DASVIALELL 150
    NSGYEFDEGS IIFNQFKSVI SYKTEEKPIF SFSTVVAAEN MSIYDDIDAD 200
    VLQNYQEYNL ANIIYYSLKE STTSEQSARM TAMDNASKNA SDMIDKLTLT 250
    FNRTRQAVIT KELIEIISGA AALVSSKGVH TWVRKGISEV MLNWQYGLLG 300
    TYLDNCSNSC NPEFWRLMGL ISKMDGFYQQ RRGMCESYSR SLLRVSVAQI 350
    CQALGWDSVQ LSACHLLTDV LQRYLQQLGR GCHRYSELYG RTDPILDDVG 400
    EAFQLMGVNL HELEDYIHNI EPVTFPHQIP SFPVSKNSVL QFPQPGSKDA 450
    EERKDYIPDY LPPIVSSQEG MPGPLQRPSY FLGLEIGTVR SRDVAAADRR 500
    WAEICAADRA SFERRIVIVT QAGDRGSHSA LDLVDVFKAF TFHHRKCIEI 550
    NFKGACEVGQ KIVSTIEYYL CVEASSAGVQ SSANKPCQPL DNCQISCCKL 600
    NMKQGCT 607
    Length:607
    Mass (Da):67,721
    Last modified:July 5, 2004 - v1
    Checksum:i85AC4C8CB9355E2D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06092815 Genomic DNA. No translation available.
    AY539950 mRNA. Translation: AAS66290.1.

    Genome annotation databases

    EnsembliENSRNOT00000041346; ENSRNOP00000049879; ENSRNOG00000019223.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06092815 Genomic DNA. No translation available.
    AY539950 mRNA. Translation: AAS66290.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000041346 ; ENSRNOP00000049879 ; ENSRNOG00000019223 .

    Organism-specific databases

    RGDi 620011. Atp5c1.
    2324594. Taf3.

    Phylogenomic databases

    GeneTreei ENSGT00390000006837.
    HOGENOMi HOG000143453.
    OMAi GMCESYS.
    OrthoDBi EOG7QK0D3.

    Gene expression databases

    Genevestigatori Q6QI09.

    Family and domain databases

    InterProi IPR000131. ATPase_F1-cplx_gsu.
    IPR023632. ATPase_F1_gsu_CS.
    IPR023633. ATPase_F1_gsu_dom.
    IPR006565. BTP.
    [Graphical view ]
    PANTHERi PTHR11693. PTHR11693. 1 hit.
    Pfami PF00231. ATP-synt. 1 hit.
    PF07524. Bromo_TP. 1 hit.
    [Graphical view ]
    PRINTSi PR00126. ATPASEGAMMA.
    SMARTi SM00576. BTP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52943. SSF52943. 1 hit.
    TIGRFAMsi TIGR01146. ATPsyn_F1gamma. 1 hit.
    PROSITEi PS00153. ATPASE_GAMMA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. "Liver regeneration after PH."
      Xu C.S., Zhang L., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
      Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiQ6QI09_RAT
    AccessioniPrimary (citable) accession number: Q6QI09
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 87 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3