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Q6QI09

- Q6QI09_RAT

UniProt

Q6QI09 - Q6QI09_RAT

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Protein
Submitted name:

ATP synthase subunit gamma, mitochondrial

Gene

Taf3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. poly(A) RNA binding Source: Ensembl
  2. proton-transporting ATPase activity, rotational mechanism Source: InterPro
  3. proton-transporting ATP synthase activity, rotational mechanism Source: InterPro

GO - Biological processi

  1. ATP synthesis coupled proton transport Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
ATP synthase subunit gamma, mitochondrialImported
Submitted name:
LRRGT00199Imported
Gene namesi
Name:Taf3Imported
Synonyms:Atp5c1Imported, LOC100360100Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 17

Organism-specific databases

RGDi620011. Atp5c1.
2324594. Taf3.

Subcellular locationi

GO - Cellular componenti

  1. extracellular vesicular exosome Source: Ensembl
  2. mitochondrial proton-transporting ATP synthase complex Source: Ensembl
  3. proton-transporting ATP synthase complex, catalytic core F(1) Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ6QI09.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000006837.
HOGENOMiHOG000143453.
OMAiGMCESYS.
OrthoDBiEOG7QK0D3.

Family and domain databases

InterProiIPR000131. ATPase_F1-cplx_gsu.
IPR023632. ATPase_F1_gsu_CS.
IPR023633. ATPase_F1_gsu_dom.
IPR006565. BTP.
[Graphical view]
PANTHERiPTHR11693. PTHR11693. 1 hit.
PfamiPF00231. ATP-synt. 1 hit.
PF07524. Bromo_TP. 1 hit.
[Graphical view]
PRINTSiPR00126. ATPASEGAMMA.
SMARTiSM00576. BTP. 1 hit.
[Graphical view]
SUPFAMiSSF52943. SSF52943. 1 hit.
TIGRFAMsiTIGR01146. ATPsyn_F1gamma. 1 hit.
PROSITEiPS00153. ATPASE_GAMMA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6QI09-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATLKDITRR LKSIKNIQKI TKSMKMVAAA KYARAERELK PARVYGTGSL
60 70 80 90 100
ALYEKAEIKG PEDKKKHLII GVSSDRGLCG AIHSSVAKQM KNDMAALTAA
110 120 130 140 150
GKEVMIVGIG EKIKSILYRT HSDQFLVSFK DVGRKPPTFG DASVIALELL
160 170 180 190 200
NSGYEFDEGS IIFNQFKSVI SYKTEEKPIF SFSTVVAAEN MSIYDDIDAD
210 220 230 240 250
VLQNYQEYNL ANIIYYSLKE STTSEQSARM TAMDNASKNA SDMIDKLTLT
260 270 280 290 300
FNRTRQAVIT KELIEIISGA AALVSSKGVH TWVRKGISEV MLNWQYGLLG
310 320 330 340 350
TYLDNCSNSC NPEFWRLMGL ISKMDGFYQQ RRGMCESYSR SLLRVSVAQI
360 370 380 390 400
CQALGWDSVQ LSACHLLTDV LQRYLQQLGR GCHRYSELYG RTDPILDDVG
410 420 430 440 450
EAFQLMGVNL HELEDYIHNI EPVTFPHQIP SFPVSKNSVL QFPQPGSKDA
460 470 480 490 500
EERKDYIPDY LPPIVSSQEG MPGPLQRPSY FLGLEIGTVR SRDVAAADRR
510 520 530 540 550
WAEICAADRA SFERRIVIVT QAGDRGSHSA LDLVDVFKAF TFHHRKCIEI
560 570 580 590 600
NFKGACEVGQ KIVSTIEYYL CVEASSAGVQ SSANKPCQPL DNCQISCCKL

NMKQGCT
Length:607
Mass (Da):67,721
Last modified:July 5, 2004 - v1
Checksum:i85AC4C8CB9355E2D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06092815 Genomic DNA. No translation available.
AY539950 mRNA. Translation: AAS66290.1.

Genome annotation databases

EnsembliENSRNOT00000041346; ENSRNOP00000049879; ENSRNOG00000019223.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06092815 Genomic DNA. No translation available.
AY539950 mRNA. Translation: AAS66290.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000041346 ; ENSRNOP00000049879 ; ENSRNOG00000019223 .

Organism-specific databases

RGDi 620011. Atp5c1.
2324594. Taf3.

Phylogenomic databases

GeneTreei ENSGT00390000006837.
HOGENOMi HOG000143453.
OMAi GMCESYS.
OrthoDBi EOG7QK0D3.

Gene expression databases

Genevestigatori Q6QI09.

Family and domain databases

InterProi IPR000131. ATPase_F1-cplx_gsu.
IPR023632. ATPase_F1_gsu_CS.
IPR023633. ATPase_F1_gsu_dom.
IPR006565. BTP.
[Graphical view ]
PANTHERi PTHR11693. PTHR11693. 1 hit.
Pfami PF00231. ATP-synt. 1 hit.
PF07524. Bromo_TP. 1 hit.
[Graphical view ]
PRINTSi PR00126. ATPASEGAMMA.
SMARTi SM00576. BTP. 1 hit.
[Graphical view ]
SUPFAMi SSF52943. SSF52943. 1 hit.
TIGRFAMsi TIGR01146. ATPsyn_F1gamma. 1 hit.
PROSITEi PS00153. ATPASE_GAMMA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. "Liver regeneration after PH."
    Xu C.S., Zhang L., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
    Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiQ6QI09_RAT
AccessioniPrimary (citable) accession number: Q6QI09
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3