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Protein

40S ribosomal protein S17

Gene

RPS17

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S17
Gene namesi
Name:RPS17
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 7

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001415272 – 13540S ribosomal protein S17Add BLAST134

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei19N6-succinyllysineBy similarity1
Cross-linki103Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)By similarity
Modified residuei113PhosphoserineBy similarity1
Modified residuei130PhosphothreonineBy similarity1

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiQ6QAP7.
PeptideAtlasiQ6QAP7.
PRIDEiQ6QAP7.

Expressioni

Gene expression databases

BgeeiENSSSCG00000027358.
GenevisibleiQ6QAP7. SS.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000020253.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50SR1-135[»]
3J7Relectron microscopy3.90SR1-135[»]
ProteinModelPortaliQ6QAP7.
SMRiQ6QAP7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S17e family.Curated

Phylogenomic databases

eggNOGiKOG0187. Eukaryota.
COG1383. LUCA.
GeneTreeiENSGT00390000006548.
HOGENOMiHOG000227166.
HOVERGENiHBG001708.
InParanoidiQ6QAP7.
KOiK02962.
OMAiVGMNFRT.
OrthoDBiEOG091G0TNU.
TreeFamiTF317992.

Family and domain databases

Gene3Di1.10.60.20. 1 hit.
HAMAPiMF_00511. Ribosomal_S17e. 1 hit.
InterProiIPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
[Graphical view]
PANTHERiPTHR10732. PTHR10732. 1 hit.
PfamiPF00833. Ribosomal_S17e. 1 hit.
[Graphical view]
SUPFAMiSSF116820. SSF116820. 1 hit.
PROSITEiPS00712. RIBOSOMAL_S17E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6QAP7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVRTKTVK KAARVIIEKY YTRLGNDFHT NKRVCEEIAI IPSKKLRNKI
60 70 80 90 100
AGYVTHLMKR IQRGPVRGIS IKLQEEERER RDNYVPEVSA LDQEIIEVDP
110 120 130
DTKEMLKLLD FGSLSNLQVT QPTVGMNFKT PRGAV
Length:135
Mass (Da):15,524
Last modified:January 23, 2007 - v3
Checksum:i29806605C5401325
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY550073 mRNA. Translation: AAS55931.1.
RefSeqiNP_001001634.1. NM_001001634.1.
UniGeneiSsc.57173.
Ssc.84070.

Genome annotation databases

EnsembliENSSSCT00000030780; ENSSSCP00000020253; ENSSSCG00000027358.
GeneIDi414392.
KEGGissc:414392.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY550073 mRNA. Translation: AAS55931.1.
RefSeqiNP_001001634.1. NM_001001634.1.
UniGeneiSsc.57173.
Ssc.84070.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50SR1-135[»]
3J7Relectron microscopy3.90SR1-135[»]
ProteinModelPortaliQ6QAP7.
SMRiQ6QAP7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000020253.

Proteomic databases

PaxDbiQ6QAP7.
PeptideAtlasiQ6QAP7.
PRIDEiQ6QAP7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000030780; ENSSSCP00000020253; ENSSSCG00000027358.
GeneIDi414392.
KEGGissc:414392.

Organism-specific databases

CTDi6218.

Phylogenomic databases

eggNOGiKOG0187. Eukaryota.
COG1383. LUCA.
GeneTreeiENSGT00390000006548.
HOGENOMiHOG000227166.
HOVERGENiHBG001708.
InParanoidiQ6QAP7.
KOiK02962.
OMAiVGMNFRT.
OrthoDBiEOG091G0TNU.
TreeFamiTF317992.

Gene expression databases

BgeeiENSSSCG00000027358.
GenevisibleiQ6QAP7. SS.

Family and domain databases

Gene3Di1.10.60.20. 1 hit.
HAMAPiMF_00511. Ribosomal_S17e. 1 hit.
InterProiIPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
[Graphical view]
PANTHERiPTHR10732. PTHR10732. 1 hit.
PfamiPF00833. Ribosomal_S17e. 1 hit.
[Graphical view]
SUPFAMiSSF116820. SSF116820. 1 hit.
PROSITEiPS00712. RIBOSOMAL_S17E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS17_PIG
AccessioniPrimary (citable) accession number: Q6QAP7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 81 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.