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Protein

40S ribosomal protein S17

Gene

RPS17

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SSC-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-SSC-72649 Translation initiation complex formation
R-SSC-72689 Formation of a pool of free 40S subunits
R-SSC-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-SSC-72702 Ribosomal scanning and start codon recognition

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S17
Gene namesi
Name:RPS17
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001415271 – 13540S ribosomal protein S17Add BLAST135

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei19N6-succinyllysineBy similarity1
Cross-linki103Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternateBy similarity
Cross-linki103Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternateBy similarity
Modified residuei113PhosphoserineBy similarity1
Modified residuei130PhosphothreonineBy similarity1

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiQ6QAP7
PeptideAtlasiQ6QAP7
PRIDEiQ6QAP7

Expressioni

Gene expression databases

BgeeiENSSSCG00000027358
GenevisibleiQ6QAP7 SS

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000020253

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50SR1-135[»]
3J7Relectron microscopy3.90SR1-135[»]
ProteinModelPortaliQ6QAP7
SMRiQ6QAP7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0187 Eukaryota
COG1383 LUCA
GeneTreeiENSGT00390000006548
HOGENOMiHOG000227166
HOVERGENiHBG001708
InParanoidiQ6QAP7
KOiK02962
OMAiATHLMRR
OrthoDBiEOG091G0TNU
TreeFamiTF317992

Family and domain databases

Gene3Di1.10.60.20, 1 hit
HAMAPiMF_00511 Ribosomal_S17e, 1 hit
InterProiView protein in InterPro
IPR001210 Ribosomal_S17e
IPR018273 Ribosomal_S17e_CS
IPR036401 RPS17e-like_sf
PANTHERiPTHR10732 PTHR10732, 1 hit
PfamiView protein in Pfam
PF00833 Ribosomal_S17e, 1 hit
SUPFAMiSSF116820 SSF116820, 1 hit
PROSITEiView protein in PROSITE
PS00712 RIBOSOMAL_S17E, 1 hit

Sequencei

Sequence statusi: Complete.

Q6QAP7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRVRTKTVK KAARVIIEKY YTRLGNDFHT NKRVCEEIAI IPSKKLRNKI
60 70 80 90 100
AGYVTHLMKR IQRGPVRGIS IKLQEEERER RDNYVPEVSA LDQEIIEVDP
110 120 130
DTKEMLKLLD FGSLSNLQVT QPTVGMNFKT PRGAV
Length:135
Mass (Da):15,524
Last modified:January 23, 2007 - v3
Checksum:i29806605C5401325
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY550073 mRNA Translation: AAS55931.1
RefSeqiNP_001001634.1, NM_001001634.1
UniGeneiSsc.57173
Ssc.84070

Genome annotation databases

EnsembliENSSSCT00000030780; ENSSSCP00000020253; ENSSSCG00000027358
GeneIDi414392
KEGGissc:414392

Similar proteinsi

Entry informationi

Entry nameiRS17_PIG
AccessioniPrimary (citable) accession number: Q6QAP7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 89 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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