Unreviewed, UniProtKB/TrEMBL Q6Q151 (Q6Q151_ARATH)

Names and origin

Protein names

Submitted name:
    Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase EMBL AAS75309.1

Gene names

Name:	CYP59 EMBL AAS75309.1
Ordered Locus Names:	At1g53720 TAIR At1g53720

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	506 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 1 PPIase cyclophilin-type domain. RuleBase RU003420V1

Ontologies

Keywords
Molecular function	Isomerase Rotamase RuleBase RU003420V1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein folding Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	nucleus Inferred from direct assay. Source: TAIR
Molecular function	RNA binding Inferred from direct assay. Source: TAIR nucleotide binding Inferred from electronic annotation. Source: InterPro peptidyl-prolyl cis-trans isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW protein binding Inferred from physical interaction. Source: IntAct zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q9SPI1	1	EBI-1625989,EBI-1632536
RPB205	P18616	2	EBI-1625989,EBI-1540537
RSP31	P92964	1	EBI-1625989,EBI-927132
RSP40	P92965	1	EBI-1625989,EBI-927153
rsz33	Q9FYA7	1	EBI-1625989,EBI-927189
RSZp21	O23645	1	EBI-1625989,EBI-927172
sc35	Q9FYB1	1	EBI-1625989,EBI-927117
scl28	Q9FYB0	1	EBI-1625989,EBI-927052
scl30	Q9FYA9	1	EBI-1625989,EBI-927061
scl30a	Q9FYA8	1	EBI-1625989,EBI-927082
scl33	Q9SEU4	1	EBI-1625989,EBI-927103
srp30	Q9XFR5	1	EBI-1625989,EBI-1540237

Sequences

	Sequence		Length	Mass (Da)
	Q6Q151-1 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: EB33E6544794283E	FASTA	506	58,829
	10 20 30 40 50 60 MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG 70 80 90 100 110 120 AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG ENLNASQFYF TLRDDLDYLD 130 140 150 160 170 180 GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS 190 200 210 220 230 240 PEGKPKEEVK DDVRLEDDWV PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP 250 260 270 280 290 300 PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA 310 320 330 340 350 360 YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS 370 380 390 400 410 420 SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS EKIQRRSPHG NGEGKRQHRD 430 440 450 460 470 480 ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS 490 500 HRDYKERRRE RDDRHGREAR HERRDR

References

[1]

"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY568526 mRNA. Translation: AAS75309.1.
IPI	IPI00547571.
RefSeq	NP_175776.2.
UniGene	At.37348
3D structure databases
HSSP	HSSP built from PDB template 1A58 based on UniProtKB Q27450.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q6Q151. 15 interactions.
STRING	Q6Q151.
Proteomic databases
PRIDE	Q6Q151.
Genome annotation databases
GeneID	841810.
KEGG	ath:AT1G53720.
NMPDR	fig|3702.1.peg.4876.
Organism-specific databases
TAIR	At1g53720.
Phylogenomic databases
OMA	MASAGEN
Gene expression databases
Genevestigator	Q6Q151.
Family and domain databases
InterPro	IPR012677. a_b_plait_nuc_bd. IPR015891. Cyclophilin-like. IPR002130. PPIase_cyclophilin. IPR000504. RRM_RNP1. IPR001878. Znf_CCHC. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit. G3DSA:2.40.100.10. PPIase_cyclophilin. 1 hit.
Pfam	PF00160. Pro_isomerase. 1 hit. PF00076. RRM_1. 1 hit. PF00098. zf-CCHC. 1 hit. [Graphical view]
PRINTS	PR00153. CSAPPISMRASE.
SMART	SM00360. RRM. 1 hit. SM00343. ZnF_C2HC. 1 hit. [Graphical view]
PROSITE	PS50072. CSA_PPIASE_2. 1 hit. PS50102. RRM. 1 hit. PS50158. ZF_CCHC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6Q151_ARATH

Accession

Primary (citable) accession number: Q6Q151

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	November 3, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)