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Q6Q0C0

- TRAF7_HUMAN

UniProt

Q6Q0C0 - TRAF7_HUMAN

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Protein
E3 ubiquitin-protein ligase TRAF7
Gene
TRAF7, RFWD1, RNF119
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

E3 ubiquitin ligase capable of auto-ubiquitination, following phosphorylation by MAP3K3. Potentiates MEKK3-mediated activation of the NF-kappa-B, JUN/AP1 and DDIT3 transcriptional regulators. Induces apoptosis when overexpressed.2 Publications

Pathwayi

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri131 – 16535RING-type
Add
BLAST
Zinc fingeri222 – 27655TRAF-type
Add
BLAST

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
  2. protein binding Source: IntAct
  3. ubiquitin-protein transferase activity Source: UniProtKB
  4. zinc ion binding Source: UniProtKB

GO - Biological processi

  1. activation of MAPKKK activity Source: UniProtKB
  2. apoptotic process Source: MGI
  3. positive regulation of MAPK cascade Source: MGI
  4. positive regulation of apoptotic signaling pathway Source: UniProtKB
  5. protein ubiquitination Source: UniProtKB
  6. regulation of transcription, DNA-templated Source: UniProtKB-KW
  7. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Biological processi

Apoptosis, Transcription, Transcription regulation, Ubl conjugation pathway

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

SignaLinkiQ6Q0C0.
UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
E3 ubiquitin-protein ligase TRAF7 (EC:6.3.2.-)
Alternative name(s):
RING finger and WD repeat-containing protein 1
RING finger protein 119
TNF receptor-associated factor 7
Gene namesi
Name:TRAF7
Synonyms:RFWD1, RNF119
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 16

Organism-specific databases

HGNCiHGNC:20456. TRAF7.

Subcellular locationi

Cytoplasmic vesicle
Note: Colocalizes with MAP3K3 to vesicle-like structures throughout the cytoplasm.1 Publication

GO - Cellular componenti

  1. cytoplasmic membrane-bounded vesicle Source: UniProtKB-SubCell
  2. ubiquitin ligase complex Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasmic vesicle

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134917323.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 670670E3 ubiquitin-protein ligase TRAF7
PRO_0000051296Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei88 – 881Phosphoserine1 Publication
Modified residuei91 – 911Phosphoserine1 Publication

Post-translational modificationi

Phosphorylated by MAP3K3.1 Publication
Ubiquitinates itself upon phosphorylation.

Keywords - PTMi

Phosphoprotein, Ubl conjugation

Proteomic databases

MaxQBiQ6Q0C0.
PaxDbiQ6Q0C0.
PRIDEiQ6Q0C0.

PTM databases

PhosphoSiteiQ6Q0C0.

Expressioni

Tissue specificityi

Ubiquitously expressed with high levels in skeletal muscle, heart, colon, spleen, kidney, liver and placenta.1 Publication

Gene expression databases

ArrayExpressiQ6Q0C0.
BgeeiQ6Q0C0.
CleanExiHS_TRAF7.
GenevestigatoriQ6Q0C0.

Organism-specific databases

HPAiHPA041229.

Interactioni

Subunit structurei

Homodimer. Interacts with MAP3K3 and promotes the kinase activity of this enzyme.2 Publications

Binary interactionsi

WithEntry#Exp.IntActNotes
MAP3K3Q997592EBI-307556,EBI-307281
Ripk4Q9ERK02EBI-307556,EBI-6116422From a different organism.

Protein-protein interaction databases

BioGridi123964. 9 interactions.
IntActiQ6Q0C0. 9 interactions.
MINTiMINT-1161375.
STRINGi9606.ENSP00000318944.

Structurei

3D structure databases

ProteinModelPortaliQ6Q0C0.
SMRiQ6Q0C0. Positions 131-266, 387-668.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati394 – 43340WD 1
Add
BLAST
Repeati437 – 47438WD 2
Add
BLAST
Repeati477 – 51337WD 3
Add
BLAST
Repeati515 – 55440WD 4
Add
BLAST
Repeati557 – 59438WD 5
Add
BLAST
Repeati597 – 63842WD 6
Add
BLAST
Repeati641 – 66929WD 7
Add
BLAST

Sequence similaritiesi

Belongs to the WD repeat TRAF7 family.
Contains 7 WD repeats.

Keywords - Domaini

Repeat, WD repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG2319.
HOGENOMiHOG000220840.
HOVERGENiHBG055270.
InParanoidiQ6Q0C0.
KOiK10646.
OMAiHSESNMS.
OrthoDBiEOG7J17Z8.
PhylomeDBiQ6Q0C0.
TreeFamiTF328643.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.30.40.10. 1 hit.
3.90.890.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR013323. SIAH-type.
IPR008974. TRAF-like.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
IPR001293. Znf_TRAF.
[Graphical view]
PfamiPF00400. WD40. 7 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00184. RING. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF49599. SSF49599. 2 hits.
SSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
PS50145. ZF_TRAF. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 11 Publication (identifier: Q6Q0C0-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MSSGKSARYN RFSGGPSNLP TPDVTTGTRM ETTFGPAFSA VTTITKADGT    50
STYKQHCRTP SSSSTLAYSP RDEEDSMPPI STPRRSDSAI SVRSLHSESS 100
MSLRSTFSLP EEEEEPEPLV FAEQPSVKLC CQLCCSVFKD PVITTCGHTF 150
CRRCALKSEK CPVDNVKLTV VVNNIAVAEQ IGELFIHCRH GCRVAGSGKP 200
PIFEVDPRGC PFTIKLSARK DHEGSCDYRP VRCPNNPSCP PLLRMNLEAH 250
LKECEHIKCP HSKYGCTFIG NQDTYETHLE TCRFEGLKEF LQQTDDRFHE 300
MHVALAQKDQ EIAFLRSMLG KLSEKIDQLE KSLELKFDVL DENQSKLSED 350
LMEFRRDASM LNDELSHINA RLNMGILGSY DPQQIFKCKG TFVGHQGPVW 400
CLCVYSMGDL LFSGSSDKTI KVWDTCTTYK CQKTLEGHDG IVLALCIQGC 450
KLYSGSADCT IIVWDIQNLQ KVNTIRAHDN PVCTLVSSHN VLFSGSLKAI 500
KVWDIVGTEL KLKKELTGLN HWVRALVAAQ SYLYSGSYQT IKIWDIRTLD 550
CIHVLQTSGG SVYSIAVTNH HIVCGTYENL IHVWDIESKE QVRTLTGHVG 600
TVYALAVIST PDQTKVFSAS YDRSLRVWSM DNMICTQTLL RHQGSVTALA 650
VSRGRLFSGA VDSTVKVWTC 670
Length:670
Mass (Da):74,609
Last modified:July 5, 2004 - v1
Checksum:i5624045D674849C6
GO
Isoform 21 Publication (identifier: Q6Q0C0-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-76: Missing.

Show »
Length:594
Mass (Da):66,541
Checksum:i25F8742FBD322058
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 7676Missing in isoform 2. 1 Publication
VSP_051607Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY569455 mRNA. Translation: AAS68363.1.
AL136921 mRNA. Translation: CAB66855.1.
CCDSiCCDS10461.1. [Q6Q0C0-1]
RefSeqiNP_115647.2. NM_032271.2. [Q6Q0C0-1]
UniGeneiHs.713632.

Genome annotation databases

EnsembliENST00000326181; ENSP00000318944; ENSG00000131653. [Q6Q0C0-1]
GeneIDi84231.
KEGGihsa:84231.
UCSCiuc002cow.3. human. [Q6Q0C0-1]

Polymorphism databases

DMDMi54036486.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY569455 mRNA. Translation: AAS68363.1 .
AL136921 mRNA. Translation: CAB66855.1 .
CCDSi CCDS10461.1. [Q6Q0C0-1 ]
RefSeqi NP_115647.2. NM_032271.2. [Q6Q0C0-1 ]
UniGenei Hs.713632.

3D structure databases

ProteinModelPortali Q6Q0C0.
SMRi Q6Q0C0. Positions 131-266, 387-668.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 123964. 9 interactions.
IntActi Q6Q0C0. 9 interactions.
MINTi MINT-1161375.
STRINGi 9606.ENSP00000318944.

PTM databases

PhosphoSitei Q6Q0C0.

Polymorphism databases

DMDMi 54036486.

Proteomic databases

MaxQBi Q6Q0C0.
PaxDbi Q6Q0C0.
PRIDEi Q6Q0C0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000326181 ; ENSP00000318944 ; ENSG00000131653 . [Q6Q0C0-1 ]
GeneIDi 84231.
KEGGi hsa:84231.
UCSCi uc002cow.3. human. [Q6Q0C0-1 ]

Organism-specific databases

CTDi 84231.
GeneCardsi GC16P002205.
HGNCi HGNC:20456. TRAF7.
HPAi HPA041229.
MIMi 606692. gene.
neXtProti NX_Q6Q0C0.
PharmGKBi PA134917323.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG2319.
HOGENOMi HOG000220840.
HOVERGENi HBG055270.
InParanoidi Q6Q0C0.
KOi K10646.
OMAi HSESNMS.
OrthoDBi EOG7J17Z8.
PhylomeDBi Q6Q0C0.
TreeFami TF328643.

Enzyme and pathway databases

UniPathwayi UPA00143 .
SignaLinki Q6Q0C0.

Miscellaneous databases

ChiTaRSi TRAF7. human.
GenomeRNAii 84231.
NextBioi 73692.
PROi Q6Q0C0.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q6Q0C0.
Bgeei Q6Q0C0.
CleanExi HS_TRAF7.
Genevestigatori Q6Q0C0.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
3.30.40.10. 1 hit.
3.90.890.10. 1 hit.
InterProi IPR020472. G-protein_beta_WD-40_rep.
IPR013323. SIAH-type.
IPR008974. TRAF-like.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
IPR001293. Znf_TRAF.
[Graphical view ]
Pfami PF00400. WD40. 7 hits.
[Graphical view ]
PRINTSi PR00320. GPROTEINBRPT.
SMARTi SM00184. RING. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view ]
SUPFAMi SSF49599. SSF49599. 2 hits.
SSF50978. SSF50978. 1 hit.
PROSITEi PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
PS50145. ZF_TRAF. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "TRAF7 potentiates MEKK3-induced AP1 and CHOP activation and induces apoptosis."
    Xu L.-G., Li L.-Y., Shu H.-B.
    J. Biol. Chem. 279:17278-17282(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, TISSUE SPECIFICITY, ALTERNATIVE SPLICING, INTERACTION WITH MAP3K3.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Uterus.
  3. Cited for: FUNCTION, PHOSPHORYLATION, SUBCELLULAR LOCATION, HOMODIMERIZATION, INTERACTION WITH MAP3K3.
  4. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-88 AND SER-91, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.

Entry informationi

Entry nameiTRAF7_HUMAN
AccessioniPrimary (citable) accession number: Q6Q0C0
Secondary accession number(s): Q9H073
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: July 5, 2004
Last modified: September 3, 2014
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 16
    Human chromosome 16: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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