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Q6PUF3 (DHI1L_DANRE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Hydroxysteroid 11-beta-dehydrogenase 1-like protein

EC=1.1.1.-
Alternative name(s):
11-beta-hydroxysteroid dehydrogenase type 3
Short name=11-DH3
Short name=11-beta-HSD3
Gene names
Name:hsd11b1l
Synonyms:hsd11b3, hsd3
ORF Names:si:dkey-78l4.15, zgc:56373
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome]
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Secreted Potential.

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   LigandNADP
   Molecular functionOxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionsteroid dehydrogenase activity

Inferred from sequence or structural similarity PubMed 15358559. Source: ZFIN

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential
Chain23 – 287265Hydroxysteroid 11-beta-dehydrogenase 1-like protein
PRO_0000316819

Regions

Nucleotide binding40 – 6627NADP By similarity
Nucleotide binding91 – 922NADP By similarity
Nucleotide binding118 – 1203NADP By similarity
Nucleotide binding182 – 1865NADP By similarity
Nucleotide binding215 – 2217NADP By similarity

Sites

Active site1821Proton acceptor By similarity
Binding site1691Substrate By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6PUF3 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: CC74BDD6D41C2CA8

FASTA28731,918
        10         20         30         40         50         60 
MKLYAKLLLC SICVAFIAVR WSAPSFNEES LKGARVLVTG ASTGIGEQLA YHYARLGAQI 

        70         80         90        100        110        120 
VITARRGNVL EQVVSKCREM GAQKAFYIPA DMANPSDADL VVKYAIEQLG GLDYLVLNHI 

       130        140        150        160        170        180 
GPSPYQMWDG DVQHTRWLLE VNFLSYLQMA QKALPTLEKS KGSIVVVSSL LGKICGPFAL 

       190        200        210        220        230        240 
PYASTKFALN GFFGGLQNEL AMQKSNVSIT ICILGLIDTD SAMEKIKGYI NMTAYPSHEA 

       250        260        270        280 
ALQIIQAGAT RQSESFYPWY TFYATLFRDW FPYLRDKVIQ NSYTYNP 

« Hide

References

« Hide 'large scale' references
[1]Huang C.Q., Zhou J.L., Wu S.L.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]The Danio rerio sequencing project at the Sanger Institute
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen.
[3]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY578180 mRNA. Translation: AAS89256.1.
BX936298 Genomic DNA. Translation: CAK11206.1.
BC071452 mRNA. Translation: AAH71452.1.
BC153593 mRNA. Translation: AAI53594.1.
IPIIPI00994585.
RefSeqNP_001099077.1. NM_001105607.1.
NP_956617.2. NM_200323.2.
UniGeneDr.120175.
Dr.78218.

3D structure databases

ProteinModelPortalQ6PUF3.
ModBaseSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000061738.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000061739; ENSDARP00000061738; ENSDARG00000071377.
GeneID100006793.
393293.
KEGGdre:100006793.
dre:393293.

Organism-specific databases

CTD393293.
ZFINZDB-GENE-040426-1002. hsd11b3a.

Phylogenomic databases

eggNOGCOG4221.
GeneTreeENSGT00650000093378.
HOGENOMHOG000010276.
HOVERGENHBG005481.
InParanoidQ6PUF3.
OMAPSPFSMW.
OrthoDBEOG405S1K.

Gene expression databases

ArrayExpressQ6PUF3.
BgeeQ6PUF3.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
[Graphical view]
PfamPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSPR00081. GDHRDH.
PROSITEPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20787272.

Entry information

Entry nameDHI1L_DANRE
AccessionPrimary (citable) accession number: Q6PUF3
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 5, 2004
Last modified: May 29, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families