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Q6PJ56 (Q6PJ56_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length296 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix SAAS SAAS003596
   Technical term3D-structure PDB 4LFH PDB 4LHU PDB 4MNG PDB 4MNH PDB 4NDM
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6PJ56 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 7F4311CD0286C141

FASTA29633,288
        10         20         30         40         50         60 
MLFSSLLCVF VAFSYSGSSV AQKVTQAQSS VSMPVRKAVT LNCLYETSWW SYYIFWYKQL 

        70         80         90        100        110        120 
PSKEMIFLIR QGSDEQNAKS GRYSVNFKKA AKSVALTISA LQLEDSAKYF CALGESFLPF 

       130        140        150        160        170        180 
RGNFHYTDKL IFGKGTRVTV EPRSQPHTKP SVFVMKNGTN VACLVKEFYP KDIRINLVSS 

       190        200        210        220        230        240 
KKITEFDPAI VISPSGKYNA VKLGKYEDSN SVTCSVQHDN KTVHSTDFEV KTDSTDHVKP 

       250        260        270        280        290 
KETENTKQPS KSCHKPKAIV HTEKVNMMSL TVLGLRMLFA KTVAVNFLLT AKLFFL 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Placenta EMBL AAH22317.1.
[2]"Crystal structure of V?1 T cell receptor in complex with CD1d-sulfatide shows MHC-like recognition of a self-lipid by human ?? T cells."
Luoma A.M., Castro C.D., Mayassi T., Bembinster L.A., Bai L., Picard D., Anderson B., Scharf L., Kung J.E., Sibener L.V., Savage P.B., Jabri B., Bendelac A., Adams E.J.
Immunity 39:1032-1042(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.01 ANGSTROMS) OF 21-142.
[3]"CD1d-lipid antigen recognition by the ?? TCR."
Uldrich A.P., Le Nours J., Pellicci D.G., Gherardin N.A., McPherson K.G., Lim R.T., Patel O., Beddoe T., Gras S., Rossjohn J., Godfrey D.I.
Nat. Immunol. 14:1137-1145(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 21-252.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC022317 mRNA. Translation: AAH22317.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4LFHX-ray2.30D21-252[»]
4LHUX-ray2.87D21-252[»]
4MNGX-ray3.01E/F21-142[»]
4MNHX-ray3.30B/D123-134[»]
B/D21-115[»]
4NDMX-ray3.01B21-142[»]
ProteinModelPortalQ6PJ56.
SMRQ6PJ56. Positions 21-229.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ6PJ56.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG106329.

Family and domain databases

Gene3D2.60.40.10. 2 hits.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003597. Ig_C1-set.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTSM00406. IGv. 1 hit.
[Graphical view]
PROSITEPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSTRA@. human.

Entry information

Entry nameQ6PJ56_HUMAN
AccessionPrimary (citable) accession number: Q6PJ56
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 19, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.