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Protein

Transmembrane protein 164

Gene

Tmem164

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Transmembrane protein 164
Gene namesi
Name:Tmem164
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:2148020. Tmem164.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei40 – 6021HelicalSequence AnalysisAdd
BLAST
Transmembranei92 – 11221HelicalSequence AnalysisAdd
BLAST
Transmembranei125 – 14521HelicalSequence AnalysisAdd
BLAST
Transmembranei149 – 16921HelicalSequence AnalysisAdd
BLAST
Transmembranei171 – 19121HelicalSequence AnalysisAdd
BLAST
Transmembranei209 – 22921HelicalSequence AnalysisAdd
BLAST
Transmembranei261 – 28121HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 296296Transmembrane protein 164PRO_0000259641Add
BLAST

Proteomic databases

MaxQBiQ6PHN7.
PaxDbiQ6PHN7.
PRIDEiQ6PHN7.

Expressioni

Gene expression databases

BgeeiQ6PHN7.
CleanExiMM_TMEM164.
ExpressionAtlasiQ6PHN7. baseline and differential.
GenevisibleiQ6PHN7. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000084591.

Structurei

3D structure databases

ProteinModelPortaliQ6PHN7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TMEM164 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG82157.
GeneTreeiENSGT00390000007430.
HOGENOMiHOG000231456.
HOVERGENiHBG055274.
InParanoidiQ6PHN7.
OMAiGPECAAF.
OrthoDBiEOG7Q5HDT.
TreeFamiTF324458.

Family and domain databases

InterProiIPR026508. TMEM164.
[Graphical view]
PANTHERiPTHR20948. PTHR20948. 1 hit.
PfamiPF14808. TMEM164. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PHN7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRYSYQSLL DWLYGGVDPS FAGNGGPDCA AFLSWQQRLL ESVVVLTLAL
60 70 80 90 100
LEILVALRHI LRQKEDGRGG RSSQPQQVTQ RPEEGKESLS KNLLLVALCL
110 120 130 140 150
IFGVEVGFKF ATKTVIYLLN PCHLVTMMHI FLLACPPCPG ATVIFKLQMH
160 170 180 190 200
MLNGALLALL FPVVNTRLLP FELEIYYIQH AMLYVVPVYL LWKGGAYTPE
210 220 230 240 250
PLCNFQWALL STGLMFFYHF SFLQILGLVT EVNLNNMLCP AISDPFYGPW
260 270 280 290
YRIWASGHQT LMTMTHGKLV ILFSYMAGPL CKYLLDLLRL PAKKID
Length:296
Mass (Da):33,441
Last modified:July 5, 2004 - v1
Checksum:i9240EBD6F9F231A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK165839 mRNA. Translation: BAE38406.1.
AK165910 mRNA. Translation: BAE38455.1.
BC056470 mRNA. Translation: AAH56470.1.
CCDSiCCDS30451.1.
RefSeqiNP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGeneiMm.249648.
Mm.487807.

Genome annotation databases

EnsembliENSMUST00000087333; ENSMUSP00000084591; ENSMUSG00000047045.
ENSMUST00000112896; ENSMUSP00000108517; ENSMUSG00000047045.
ENSMUST00000133634; ENSMUSP00000138503; ENSMUSG00000047045.
GeneIDi209497.
KEGGimmu:209497.
UCSCiuc009ulx.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK165839 mRNA. Translation: BAE38406.1.
AK165910 mRNA. Translation: BAE38455.1.
BC056470 mRNA. Translation: AAH56470.1.
CCDSiCCDS30451.1.
RefSeqiNP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGeneiMm.249648.
Mm.487807.

3D structure databases

ProteinModelPortaliQ6PHN7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000084591.

Proteomic databases

MaxQBiQ6PHN7.
PaxDbiQ6PHN7.
PRIDEiQ6PHN7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000087333; ENSMUSP00000084591; ENSMUSG00000047045.
ENSMUST00000112896; ENSMUSP00000108517; ENSMUSG00000047045.
ENSMUST00000133634; ENSMUSP00000138503; ENSMUSG00000047045.
GeneIDi209497.
KEGGimmu:209497.
UCSCiuc009ulx.2. mouse.

Organism-specific databases

CTDi84187.
MGIiMGI:2148020. Tmem164.

Phylogenomic databases

eggNOGiNOG82157.
GeneTreeiENSGT00390000007430.
HOGENOMiHOG000231456.
HOVERGENiHBG055274.
InParanoidiQ6PHN7.
OMAiGPECAAF.
OrthoDBiEOG7Q5HDT.
TreeFamiTF324458.

Miscellaneous databases

ChiTaRSiTmem164. mouse.
NextBioi372693.
PROiQ6PHN7.
SOURCEiSearch...

Gene expression databases

BgeeiQ6PHN7.
CleanExiMM_TMEM164.
ExpressionAtlasiQ6PHN7. baseline and differential.
GenevisibleiQ6PHN7. MM.

Family and domain databases

InterProiIPR026508. TMEM164.
[Graphical view]
PANTHERiPTHR20948. PTHR20948. 1 hit.
PfamiPF14808. TMEM164. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Lung.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6.
    Tissue: Brain.

Entry informationi

Entry nameiTM164_MOUSE
AccessioniPrimary (citable) accession number: Q6PHN7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 5, 2004
Last modified: June 24, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.