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Q6PHN7

- TM164_MOUSE

UniProt

Q6PHN7 - TM164_MOUSE

Protein

Transmembrane protein 164

Gene

Tmem164

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Transmembrane protein 164
    Gene namesi
    Name:Tmem164
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome X

    Organism-specific databases

    MGIiMGI:2148020. Tmem164.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 296296Transmembrane protein 164PRO_0000259641Add
    BLAST

    Proteomic databases

    PaxDbiQ6PHN7.
    PRIDEiQ6PHN7.

    Expressioni

    Gene expression databases

    ArrayExpressiQ6PHN7.
    BgeeiQ6PHN7.
    CleanExiMM_TMEM164.
    GenevestigatoriQ6PHN7.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6PHN7.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei40 – 6021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei92 – 11221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei125 – 14521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei149 – 16921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei171 – 19121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei209 – 22921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei261 – 28121HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the TMEM164 family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG82157.
    GeneTreeiENSGT00390000007430.
    HOGENOMiHOG000231456.
    HOVERGENiHBG055274.
    OMAiGPECAAF.
    OrthoDBiEOG7Q5HDT.
    TreeFamiTF324458.

    Family and domain databases

    InterProiIPR026508. TMEM164.
    [Graphical view]
    PANTHERiPTHR20948. PTHR20948. 1 hit.
    PfamiPF14808. TMEM164. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6PHN7-1 [UniParc]FASTAAdd to Basket

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    MSRYSYQSLL DWLYGGVDPS FAGNGGPDCA AFLSWQQRLL ESVVVLTLAL    50
    LEILVALRHI LRQKEDGRGG RSSQPQQVTQ RPEEGKESLS KNLLLVALCL 100
    IFGVEVGFKF ATKTVIYLLN PCHLVTMMHI FLLACPPCPG ATVIFKLQMH 150
    MLNGALLALL FPVVNTRLLP FELEIYYIQH AMLYVVPVYL LWKGGAYTPE 200
    PLCNFQWALL STGLMFFYHF SFLQILGLVT EVNLNNMLCP AISDPFYGPW 250
    YRIWASGHQT LMTMTHGKLV ILFSYMAGPL CKYLLDLLRL PAKKID 296
    Length:296
    Mass (Da):33,441
    Last modified:July 5, 2004 - v1
    Checksum:i9240EBD6F9F231A9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK165839 mRNA. Translation: BAE38406.1.
    AK165910 mRNA. Translation: BAE38455.1.
    BC056470 mRNA. Translation: AAH56470.1.
    CCDSiCCDS30451.1.
    RefSeqiNP_001186289.1. NM_001199360.1.
    NP_808260.2. NM_177592.4.
    UniGeneiMm.249648.
    Mm.487807.

    Genome annotation databases

    EnsembliENSMUST00000087333; ENSMUSP00000084591; ENSMUSG00000047045.
    ENSMUST00000112896; ENSMUSP00000108517; ENSMUSG00000047045.
    ENSMUST00000133634; ENSMUSP00000138503; ENSMUSG00000047045.
    GeneIDi209497.
    KEGGimmu:209497.
    UCSCiuc009ulx.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK165839 mRNA. Translation: BAE38406.1 .
    AK165910 mRNA. Translation: BAE38455.1 .
    BC056470 mRNA. Translation: AAH56470.1 .
    CCDSi CCDS30451.1.
    RefSeqi NP_001186289.1. NM_001199360.1.
    NP_808260.2. NM_177592.4.
    UniGenei Mm.249648.
    Mm.487807.

    3D structure databases

    ProteinModelPortali Q6PHN7.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi Q6PHN7.
    PRIDEi Q6PHN7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000087333 ; ENSMUSP00000084591 ; ENSMUSG00000047045 .
    ENSMUST00000112896 ; ENSMUSP00000108517 ; ENSMUSG00000047045 .
    ENSMUST00000133634 ; ENSMUSP00000138503 ; ENSMUSG00000047045 .
    GeneIDi 209497.
    KEGGi mmu:209497.
    UCSCi uc009ulx.2. mouse.

    Organism-specific databases

    CTDi 84187.
    MGIi MGI:2148020. Tmem164.

    Phylogenomic databases

    eggNOGi NOG82157.
    GeneTreei ENSGT00390000007430.
    HOGENOMi HOG000231456.
    HOVERGENi HBG055274.
    OMAi GPECAAF.
    OrthoDBi EOG7Q5HDT.
    TreeFami TF324458.

    Miscellaneous databases

    NextBioi 372693.
    PROi Q6PHN7.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q6PHN7.
    Bgeei Q6PHN7.
    CleanExi MM_TMEM164.
    Genevestigatori Q6PHN7.

    Family and domain databases

    InterProi IPR026508. TMEM164.
    [Graphical view ]
    PANTHERi PTHR20948. PTHR20948. 1 hit.
    Pfami PF14808. TMEM164. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Lung.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6.
      Tissue: Brain.

    Entry informationi

    Entry nameiTM164_MOUSE
    AccessioniPrimary (citable) accession number: Q6PHN7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3