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Q6PHN7 (TM164_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Transmembrane protein 164
Gene names
Name:Tmem164
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length296 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the TMEM164 family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 296296Transmembrane protein 164
PRO_0000259641

Regions

Transmembrane40 – 6021Helical; Potential
Transmembrane92 – 11221Helical; Potential
Transmembrane125 – 14521Helical; Potential
Transmembrane149 – 16921Helical; Potential
Transmembrane171 – 19121Helical; Potential
Transmembrane209 – 22921Helical; Potential
Transmembrane261 – 28121Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q6PHN7 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 9240EBD6F9F231A9

FASTA29633,441
        10         20         30         40         50         60 
MSRYSYQSLL DWLYGGVDPS FAGNGGPDCA AFLSWQQRLL ESVVVLTLAL LEILVALRHI 

        70         80         90        100        110        120 
LRQKEDGRGG RSSQPQQVTQ RPEEGKESLS KNLLLVALCL IFGVEVGFKF ATKTVIYLLN 

       130        140        150        160        170        180 
PCHLVTMMHI FLLACPPCPG ATVIFKLQMH MLNGALLALL FPVVNTRLLP FELEIYYIQH 

       190        200        210        220        230        240 
AMLYVVPVYL LWKGGAYTPE PLCNFQWALL STGLMFFYHF SFLQILGLVT EVNLNNMLCP 

       250        260        270        280        290 
AISDPFYGPW YRIWASGHQT LMTMTHGKLV ILFSYMAGPL CKYLLDLLRL PAKKID 

« Hide

References

[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Lung.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6.
Tissue: Brain.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK165839 mRNA. Translation: BAE38406.1.
AK165910 mRNA. Translation: BAE38455.1.
BC056470 mRNA. Translation: AAH56470.1.
RefSeqNP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGeneMm.249648.
Mm.487807.

3D structure databases

ProteinModelPortalQ6PHN7.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbQ6PHN7.
PRIDEQ6PHN7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000087333; ENSMUSP00000084591; ENSMUSG00000047045.
ENSMUST00000112896; ENSMUSP00000108517; ENSMUSG00000047045.
ENSMUST00000133634; ENSMUSP00000138503; ENSMUSG00000047045.
GeneID209497.
KEGGmmu:209497.
UCSCuc009ulx.2. mouse.

Organism-specific databases

CTD84187.
MGIMGI:2148020. Tmem164.

Phylogenomic databases

eggNOGNOG82157.
GeneTreeENSGT00390000007430.
HOGENOMHOG000231456.
HOVERGENHBG055274.
OMAGPECAAF.
OrthoDBEOG7Q5HDT.
TreeFamTF324458.

Gene expression databases

ArrayExpressQ6PHN7.
BgeeQ6PHN7.
CleanExMM_TMEM164.
GenevestigatorQ6PHN7.

Family and domain databases

InterProIPR026508. TMEM164.
[Graphical view]
PANTHERPTHR20948. PTHR20948. 1 hit.
ProtoNetSearch...

Other

NextBio372693.
PROQ6PHN7.
SOURCESearch...

Entry information

Entry nameTM164_MOUSE
AccessionPrimary (citable) accession number: Q6PHN7
Entry history
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 5, 2004
Last modified: February 19, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot