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Q6PHN7

- TM164_MOUSE

UniProt

Q6PHN7 - TM164_MOUSE

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Protein
Transmembrane protein 164
Gene
Tmem164
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Transmembrane protein 164
Gene namesi
Name:Tmem164
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:2148020. Tmem164.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei40 – 6021Helical; Reviewed prediction
Add
BLAST
Transmembranei92 – 11221Helical; Reviewed prediction
Add
BLAST
Transmembranei125 – 14521Helical; Reviewed prediction
Add
BLAST
Transmembranei149 – 16921Helical; Reviewed prediction
Add
BLAST
Transmembranei171 – 19121Helical; Reviewed prediction
Add
BLAST
Transmembranei209 – 22921Helical; Reviewed prediction
Add
BLAST
Transmembranei261 – 28121Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 296296Transmembrane protein 164
PRO_0000259641Add
BLAST

Proteomic databases

PaxDbiQ6PHN7.
PRIDEiQ6PHN7.

Expressioni

Gene expression databases

ArrayExpressiQ6PHN7.
BgeeiQ6PHN7.
CleanExiMM_TMEM164.
GenevestigatoriQ6PHN7.

Structurei

3D structure databases

ProteinModelPortaliQ6PHN7.

Family & Domainsi

Sequence similaritiesi

Belongs to the TMEM164 family.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG82157.
GeneTreeiENSGT00390000007430.
HOGENOMiHOG000231456.
HOVERGENiHBG055274.
OMAiGPECAAF.
OrthoDBiEOG7Q5HDT.
TreeFamiTF324458.

Family and domain databases

InterProiIPR026508. TMEM164.
[Graphical view]
PANTHERiPTHR20948. PTHR20948. 1 hit.
PfamiPF14808. TMEM164. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PHN7-1 [UniParc]FASTAAdd to Basket

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MSRYSYQSLL DWLYGGVDPS FAGNGGPDCA AFLSWQQRLL ESVVVLTLAL    50
LEILVALRHI LRQKEDGRGG RSSQPQQVTQ RPEEGKESLS KNLLLVALCL 100
IFGVEVGFKF ATKTVIYLLN PCHLVTMMHI FLLACPPCPG ATVIFKLQMH 150
MLNGALLALL FPVVNTRLLP FELEIYYIQH AMLYVVPVYL LWKGGAYTPE 200
PLCNFQWALL STGLMFFYHF SFLQILGLVT EVNLNNMLCP AISDPFYGPW 250
YRIWASGHQT LMTMTHGKLV ILFSYMAGPL CKYLLDLLRL PAKKID 296
Length:296
Mass (Da):33,441
Last modified:July 5, 2004 - v1
Checksum:i9240EBD6F9F231A9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK165839 mRNA. Translation: BAE38406.1.
AK165910 mRNA. Translation: BAE38455.1.
BC056470 mRNA. Translation: AAH56470.1.
CCDSiCCDS30451.1.
RefSeqiNP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGeneiMm.249648.
Mm.487807.

Genome annotation databases

EnsembliENSMUST00000087333; ENSMUSP00000084591; ENSMUSG00000047045.
ENSMUST00000112896; ENSMUSP00000108517; ENSMUSG00000047045.
ENSMUST00000133634; ENSMUSP00000138503; ENSMUSG00000047045.
GeneIDi209497.
KEGGimmu:209497.
UCSCiuc009ulx.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK165839 mRNA. Translation: BAE38406.1 .
AK165910 mRNA. Translation: BAE38455.1 .
BC056470 mRNA. Translation: AAH56470.1 .
CCDSi CCDS30451.1.
RefSeqi NP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGenei Mm.249648.
Mm.487807.

3D structure databases

ProteinModelPortali Q6PHN7.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q6PHN7.
PRIDEi Q6PHN7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000087333 ; ENSMUSP00000084591 ; ENSMUSG00000047045 .
ENSMUST00000112896 ; ENSMUSP00000108517 ; ENSMUSG00000047045 .
ENSMUST00000133634 ; ENSMUSP00000138503 ; ENSMUSG00000047045 .
GeneIDi 209497.
KEGGi mmu:209497.
UCSCi uc009ulx.2. mouse.

Organism-specific databases

CTDi 84187.
MGIi MGI:2148020. Tmem164.

Phylogenomic databases

eggNOGi NOG82157.
GeneTreei ENSGT00390000007430.
HOGENOMi HOG000231456.
HOVERGENi HBG055274.
OMAi GPECAAF.
OrthoDBi EOG7Q5HDT.
TreeFami TF324458.

Miscellaneous databases

NextBioi 372693.
PROi Q6PHN7.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q6PHN7.
Bgeei Q6PHN7.
CleanExi MM_TMEM164.
Genevestigatori Q6PHN7.

Family and domain databases

InterProi IPR026508. TMEM164.
[Graphical view ]
PANTHERi PTHR20948. PTHR20948. 1 hit.
Pfami PF14808. TMEM164. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Lung.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6.
    Tissue: Brain.

Entry informationi

Entry nameiTM164_MOUSE
AccessioniPrimary (citable) accession number: Q6PHN7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi