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Q6PHN7

- TM164_MOUSE

UniProt

Q6PHN7 - TM164_MOUSE

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Protein

Transmembrane protein 164

Gene

Tmem164

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Transmembrane protein 164
Gene namesi
Name:Tmem164
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:2148020. Tmem164.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei40 – 6021HelicalSequence AnalysisAdd
BLAST
Transmembranei92 – 11221HelicalSequence AnalysisAdd
BLAST
Transmembranei125 – 14521HelicalSequence AnalysisAdd
BLAST
Transmembranei149 – 16921HelicalSequence AnalysisAdd
BLAST
Transmembranei171 – 19121HelicalSequence AnalysisAdd
BLAST
Transmembranei209 – 22921HelicalSequence AnalysisAdd
BLAST
Transmembranei261 – 28121HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 296296Transmembrane protein 164PRO_0000259641Add
BLAST

Proteomic databases

MaxQBiQ6PHN7.
PaxDbiQ6PHN7.
PRIDEiQ6PHN7.

Expressioni

Gene expression databases

BgeeiQ6PHN7.
CleanExiMM_TMEM164.
ExpressionAtlasiQ6PHN7. baseline and differential.
GenevestigatoriQ6PHN7.

Structurei

3D structure databases

ProteinModelPortaliQ6PHN7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TMEM164 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG82157.
GeneTreeiENSGT00390000007430.
HOGENOMiHOG000231456.
HOVERGENiHBG055274.
InParanoidiQ6PHN7.
OMAiGPECAAF.
OrthoDBiEOG7Q5HDT.
TreeFamiTF324458.

Family and domain databases

InterProiIPR026508. TMEM164.
[Graphical view]
PANTHERiPTHR20948. PTHR20948. 1 hit.
PfamiPF14808. TMEM164. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PHN7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRYSYQSLL DWLYGGVDPS FAGNGGPDCA AFLSWQQRLL ESVVVLTLAL
60 70 80 90 100
LEILVALRHI LRQKEDGRGG RSSQPQQVTQ RPEEGKESLS KNLLLVALCL
110 120 130 140 150
IFGVEVGFKF ATKTVIYLLN PCHLVTMMHI FLLACPPCPG ATVIFKLQMH
160 170 180 190 200
MLNGALLALL FPVVNTRLLP FELEIYYIQH AMLYVVPVYL LWKGGAYTPE
210 220 230 240 250
PLCNFQWALL STGLMFFYHF SFLQILGLVT EVNLNNMLCP AISDPFYGPW
260 270 280 290
YRIWASGHQT LMTMTHGKLV ILFSYMAGPL CKYLLDLLRL PAKKID
Length:296
Mass (Da):33,441
Last modified:July 5, 2004 - v1
Checksum:i9240EBD6F9F231A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK165839 mRNA. Translation: BAE38406.1.
AK165910 mRNA. Translation: BAE38455.1.
BC056470 mRNA. Translation: AAH56470.1.
CCDSiCCDS30451.1.
RefSeqiNP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGeneiMm.249648.
Mm.487807.

Genome annotation databases

EnsembliENSMUST00000087333; ENSMUSP00000084591; ENSMUSG00000047045.
ENSMUST00000112896; ENSMUSP00000108517; ENSMUSG00000047045.
ENSMUST00000133634; ENSMUSP00000138503; ENSMUSG00000047045.
GeneIDi209497.
KEGGimmu:209497.
UCSCiuc009ulx.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK165839 mRNA. Translation: BAE38406.1 .
AK165910 mRNA. Translation: BAE38455.1 .
BC056470 mRNA. Translation: AAH56470.1 .
CCDSi CCDS30451.1.
RefSeqi NP_001186289.1. NM_001199360.1.
NP_808260.2. NM_177592.4.
UniGenei Mm.249648.
Mm.487807.

3D structure databases

ProteinModelPortali Q6PHN7.
ModBasei Search...
MobiDBi Search...

Proteomic databases

MaxQBi Q6PHN7.
PaxDbi Q6PHN7.
PRIDEi Q6PHN7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000087333 ; ENSMUSP00000084591 ; ENSMUSG00000047045 .
ENSMUST00000112896 ; ENSMUSP00000108517 ; ENSMUSG00000047045 .
ENSMUST00000133634 ; ENSMUSP00000138503 ; ENSMUSG00000047045 .
GeneIDi 209497.
KEGGi mmu:209497.
UCSCi uc009ulx.2. mouse.

Organism-specific databases

CTDi 84187.
MGIi MGI:2148020. Tmem164.

Phylogenomic databases

eggNOGi NOG82157.
GeneTreei ENSGT00390000007430.
HOGENOMi HOG000231456.
HOVERGENi HBG055274.
InParanoidi Q6PHN7.
OMAi GPECAAF.
OrthoDBi EOG7Q5HDT.
TreeFami TF324458.

Miscellaneous databases

ChiTaRSi Tmem164. mouse.
NextBioi 372693.
PROi Q6PHN7.
SOURCEi Search...

Gene expression databases

Bgeei Q6PHN7.
CleanExi MM_TMEM164.
ExpressionAtlasi Q6PHN7. baseline and differential.
Genevestigatori Q6PHN7.

Family and domain databases

InterProi IPR026508. TMEM164.
[Graphical view ]
PANTHERi PTHR20948. PTHR20948. 1 hit.
Pfami PF14808. TMEM164. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Lung.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6.
    Tissue: Brain.

Entry informationi

Entry nameiTM164_MOUSE
AccessioniPrimary (citable) accession number: Q6PHN7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 5, 2004
Last modified: November 26, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3