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Protein

Interleukin-20 receptor subunit alpha

Gene

Il20ra

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

The IL20RA/IL20RB dimer is a receptor for IL19, IL20 and IL24. The IL20RA/IL10RB dimer is a receptor for IL26 (By similarity).By similarity

GO - Molecular functioni

  1. cytokine receptor activity Source: GO_Central
  2. interleukin-20 binding Source: MGI

GO - Biological processi

  1. cytokine-mediated signaling pathway Source: MGI
  2. positive regulation of intrinsic apoptotic signaling pathway Source: MGI
  3. regulation of bone resorption Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Interleukin-20 receptor subunit alpha
Short name:
IL-20 receptor subunit alpha
Short name:
IL-20R-alpha
Short name:
IL-20RA
Alternative name(s):
IL-20R1
Gene namesi
Name:Il20ra
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 10

Organism-specific databases

MGIiMGI:3605069. Il20ra.

Subcellular locationi

Membrane By similarity; Single-pass type I membrane protein By similarity

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini33 – 253221ExtracellularSequence AnalysisAdd
BLAST
Transmembranei254 – 27421HelicalSequence AnalysisAdd
BLAST
Topological domaini275 – 546272CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: GO_Central
  2. plasma membrane Source: GO_Central
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232Sequence AnalysisAdd
BLAST
Chaini33 – 546514Interleukin-20 receptor subunit alphaPRO_0000011037Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi45 – 451N-linked (GlcNAc...)Sequence Analysis
Glycosylationi86 – 861N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi90 ↔ 98By similarity
Glycosylationi94 – 941N-linked (GlcNAc...)Sequence Analysis
Glycosylationi185 – 1851N-linked (GlcNAc...)Sequence Analysis
Glycosylationi203 – 2031N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi218 ↔ 239By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiQ6PHB0.

PTM databases

PhosphoSiteiQ6PHB0.

Expressioni

Gene expression databases

BgeeiQ6PHB0.
CleanExiMM_IL20RA.
GenevestigatoriQ6PHB0.

Interactioni

Subunit structurei

Heterodimer with IL20RB and heterodimer with IL10RB.By similarity

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000020185.

Structurei

3D structure databases

ProteinModelPortaliQ6PHB0.
SMRiQ6PHB0. Positions 42-244.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 13897Fibronectin type-III 1PROSITE-ProRule annotationAdd
BLAST
Domaini139 – 245107Fibronectin type-III 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the type II cytokine receptor family.Curated
Contains 2 fibronectin type-III domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG25594.
GeneTreeiENSGT00530000063352.
HOGENOMiHOG000112987.
HOVERGENiHBG052065.
InParanoidiQ6PHB0.
KOiK05136.
OMAiQFMEEWG.
OrthoDBiEOG7C2R12.
PhylomeDBiQ6PHB0.
TreeFamiTF334107.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
IPR015713. IL-20_rcpt_alpha.
IPR015373. Interferon_alpha/beta_rcpt_bsu.
[Graphical view]
PANTHERiPTHR20859:SF21. PTHR20859:SF21. 1 hit.
PfamiPF09294. Interfer-bind. 1 hit.
PF01108. Tissue_fac. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 2 hits.
PROSITEiPS50853. FN3. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6PHB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHTPGTPAPG HPDPPPLLLL TLLLLLAASG RAVPCVFCGL PKPTNITFLS
60 70 80 90 100
INMKNVLHWN PPESLHGVEV TYTVQYFIYG QKKWLNASKC GSINRTYCDL
110 120 130 140 150
SVETSDYEHQ FYAKVKAIWE ARCSEWAETE RFYPFLETQV SPPEVALTTG
160 170 180 190 200
EKSISIALTA PEKWKRNPQD HTVSMQQIYP NLKYNVSVYN TKSRRTWSQC
210 220 230 240 250
VTNSTLVLSW LEPNTLYCVH VESLVPGPPR LPMPSQKQCI STLEVQTSAW
260 270 280 290 300
KAKVIFWYVF LTSVIVFLFS AIGYLVYRYI HVGKEKHPAN LVLIYRNEIG
310 320 330 340 350
TRVFEPTETI TLNFITFSML DDTKISPKDM NLLDKSSDDI SVNDPEHNEA
360 370 380 390 400
WEPHWEEVEG QHLGCSSHLM DAVCGAEQRD GDTSLTQHGW LNSTIPTGET
410 420 430 440 450
DTEPQYKVLS DFYGEGEIQL SCEPEEAART EKISEPLVTS ANLDPQLEDL
460 470 480 490 500
HHLGQEHTVS EDGPEEETSI TVVDWDPQTG RLCIPSLPIF GRDPENYGHY
510 520 530 540
ERDQLLEGGL LSRLYENQAP DKPEKENENC LTRFMEEWGL HVQMES
Length:546
Mass (Da):61,978
Last modified:August 31, 2004 - v2
Checksum:iE7EC07DA2D49AF7F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti145 – 1451V → I in AAH56628 (PubMed:15489334).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK054215 mRNA. Translation: BAC35695.1.
BC056628 mRNA. Translation: AAH56628.1.
CCDSiCCDS23718.1.
RefSeqiNP_766374.1. NM_172786.2.
XP_006512789.1. XM_006512726.1.
XP_006512790.1. XM_006512727.1.
UniGeneiMm.234667.

Genome annotation databases

EnsembliENSMUST00000020185; ENSMUSP00000020185; ENSMUSG00000020007.
GeneIDi237313.
KEGGimmu:237313.
UCSCiuc007eni.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK054215 mRNA. Translation: BAC35695.1.
BC056628 mRNA. Translation: AAH56628.1.
CCDSiCCDS23718.1.
RefSeqiNP_766374.1. NM_172786.2.
XP_006512789.1. XM_006512726.1.
XP_006512790.1. XM_006512727.1.
UniGeneiMm.234667.

3D structure databases

ProteinModelPortaliQ6PHB0.
SMRiQ6PHB0. Positions 42-244.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000020185.

PTM databases

PhosphoSiteiQ6PHB0.

Proteomic databases

PRIDEiQ6PHB0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000020185; ENSMUSP00000020185; ENSMUSG00000020007.
GeneIDi237313.
KEGGimmu:237313.
UCSCiuc007eni.1. mouse.

Organism-specific databases

CTDi53832.
MGIiMGI:3605069. Il20ra.

Phylogenomic databases

eggNOGiNOG25594.
GeneTreeiENSGT00530000063352.
HOGENOMiHOG000112987.
HOVERGENiHBG052065.
InParanoidiQ6PHB0.
KOiK05136.
OMAiQFMEEWG.
OrthoDBiEOG7C2R12.
PhylomeDBiQ6PHB0.
TreeFamiTF334107.

Miscellaneous databases

NextBioi383294.
PROiQ6PHB0.
SOURCEiSearch...

Gene expression databases

BgeeiQ6PHB0.
CleanExiMM_IL20RA.
GenevestigatoriQ6PHB0.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
IPR015713. IL-20_rcpt_alpha.
IPR015373. Interferon_alpha/beta_rcpt_bsu.
[Graphical view]
PANTHERiPTHR20859:SF21. PTHR20859:SF21. 1 hit.
PfamiPF09294. Interfer-bind. 1 hit.
PF01108. Tissue_fac. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 2 hits.
PROSITEiPS50853. FN3. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Oviduct.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: 129.
    Tissue: Mammary tumor.

Entry informationi

Entry nameiI20RA_MOUSE
AccessioniPrimary (citable) accession number: Q6PHB0
Secondary accession number(s): Q8BW64
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 31, 2004
Last sequence update: August 31, 2004
Last modified: February 4, 2015
This is version 91 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.