Q6PGW8 (Q6PGW8_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Arginyl-tRNA synthetase 2, mitochondrial (Putative) EMBL AAH56803.1

Gene names

Name:	rars2 ZFIN ZDB-GENE-040426-1244
ORF Names:	zgc:63702 ZFIN ZDB-GENE-040426-1244

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH56803.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	597 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003489
Ligand	ATP-binding RuleBase RU003489 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003489 EMBL AAH56803.1 Ligase
Gene Ontology (GO)
Biological process	arginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro brain morphogenesis Inferred from mutant phenotype. Source: ZFIN
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW arginine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6PGW8 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 7571ECA8B3144CAD	FASTA	597	67,282
	10 20 30 40 50 60 MACFFRRSAA LQLAKACGQN EETLIPLISV APVNKKQSVA DLRVSVSHLL QSGAVRPDGD 70 80 90 100 110 120 LQNTTHTLAR QIRTDAVVEE IIPGRGVIHF RLNKLLLAQK LLDQLRSDPD GFGVKSEILR 130 140 150 160 170 180 QLRVGRTLVE FSSPNIAKKF HAGHLRSTII GNFIANLKKA LGNEVIRVNY LGDWGMQFGL 190 200 210 220 230 240 LGSGFERFGS QEKLRTQPLE HLFESSVGGC CVYLYGSAVC VRPQVYVQVN REAESDASVR 250 260 270 280 290 300 SAAAHFFRRL EQSEEQALEL WRHFREITIH EYKRIYQRLG VEFDHYSGES FHRAETQTVL 310 320 330 340 350 360 DELRSRCLLK TSQKGTGVVD LSDKGDMSNY ATLVRSDGTS LYITRDVAAA LDRKQRFSFD 370 380 390 400 410 420 EMIYVTDKSQ TMHFQQLFRI LQAMGHQWAG SCHHVAFGLV QGMSTRRGEV LFLEDVLEEA 430 440 450 460 470 480 QSRMIHNMRQ SRTSKELEDP ELTAERIGIS ALIVQDFKGP LISDYRFEWD KVLQAQGDTG 490 500 510 520 530 540 VFLQYTHARL CSLLRQQDCE ISCSDFSPLT DSRSVSLLQH LLRYDEVLLQ CATDLQPKHL 550 560 570 580 590 VNFLMTLSHL VASAHRELPV KGSSEAVAQA RLCLFSSVHS VLANGMRILG ITPVDKM

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: AB EMBL AAH56803.1. Tissue: Whole body EMBL AAH56803.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC056803 mRNA. Translation: AAH56803.1.
IPI	IPI00481790.
RefSeq	NP_956911.1. NM_200617.1.
UniGene	Dr.6341.
3D structure databases
ProteinModelPortal	Q6PGW8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6PGW8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	393589.
KEGG	dre:393589.
Organism-specific databases
CTD	57038.
ZFIN	ZDB-GENE-040426-1244. rars2.
Phylogenomic databases
eggNOG	fiNOG12729.
GeneTree	ENSGT00530000063407.
HOVERGEN	HBG057355.
PhylomeDB	Q6PGW8.
Gene expression databases
ArrayExpress	Q6PGW8.
Bgee	Q6PGW8.
Family and domain databases
InterPro	IPR001412. aa-tRNA-synth_I_CS. IPR001278. Arg-tRNA-synth_Ia. IPR015945. Arg-tRNA-synth_Ia_core. IPR008909. DALR_anticod-bd. IPR014729. Rossmann-like_a/b/a_fold. IPR009080. tRNAsynth_1a_anticodon-bd. [Graphical view]
Gene3D	G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KO	K01887.
PANTHER	PTHR11956. Arg_tRNA-synt_1c. 1 hit.
Pfam	PF05746. DALR_1. 1 hit. PF00750. tRNA-synt_1d. 1 hit. [Graphical view]
PRINTS	PR01038. TRNASYNTHARG.
SMART	SM00836. DALR_1. 1 hit. [Graphical view]
SUPFAM	SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMs	TIGR00456. ArgS. 1 hit.
PROSITE	PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6PGW8_DANRE

Accession

Primary (citable) accession number: Q6PGW8

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	November 16, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)