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Protein

Ubiquitin domain-containing protein 2

Gene

Ubtd2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin domain-containing protein 2
Gene namesi
Name:Ubtd2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:2444752. Ubtd2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 234234Ubiquitin domain-containing protein 2PRO_0000244333Add
BLAST

Proteomic databases

MaxQBiQ6PGH0.
PaxDbiQ6PGH0.
PeptideAtlasiQ6PGH0.
PRIDEiQ6PGH0.

PTM databases

iPTMnetiQ6PGH0.
PhosphoSiteiQ6PGH0.
SwissPalmiQ6PGH0.

Expressioni

Gene expression databases

BgeeiENSMUSG00000044949.
CleanExiMM_UBTD2.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000056765.

Structurei

3D structure databases

ProteinModelPortaliQ6PGH0.
SMRiQ6PGH0. Positions 14-141, 149-227.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini152 – 22776Ubiquitin-likePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ubiquitin-like domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0013. Eukaryota.
ENOG410XRPV. LUCA.
GeneTreeiENSGT00390000006816.
HOGENOMiHOG000231205.
HOVERGENiHBG080179.
InParanoidiQ6PGH0.
OMAiMIEEKGD.
OrthoDBiEOG091G0FKF.
PhylomeDBiQ6PGH0.
TreeFamiTF323925.

Family and domain databases

InterProiIPR032752. UBD.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF16455. UBD. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PGH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGCVGAQHD SSGSLNENSD GTGVALGRNQ PLKKEKPKWK SDYPMTDGQL
60 70 80 90 100
RSKRDEFWDT APAFEGRKEI WDALKAAAHA FESNDHELAQ AIIDGANITL
110 120 130 140 150
PHGALTECYD ELGNRYQLPV YCLAPPINMI EEKSDIETLD IPEPPPNSGH
160 170 180 190 200
ESQLRLRLST GKDLRLVVRS TDTVFHMKRR LHATEGVEPG SQRWFFSGRP
210 220 230
LTDKMKLEEL KIPKDYVVQV IVSQPVQTPT PVEN
Length:234
Mass (Da):26,144
Last modified:July 5, 2004 - v1
Checksum:i3A980ECD7EE97CEE
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti13 – 131G → D in BAC36536 (PubMed:16141072).Curated
Sequence conflicti187 – 1871V → L in BAC36536 (PubMed:16141072).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK076953 mRNA. Translation: BAC36536.1.
AL662780, AL669844 Genomic DNA. Translation: CAM22518.1.
AL669844, AL662780 Genomic DNA. Translation: CAI25521.1.
BC057026 mRNA. Translation: AAH57026.1.
CCDSiCCDS24527.1.
RefSeqiNP_776145.2. NM_173784.3.
UniGeneiMm.260956.

Genome annotation databases

EnsembliENSMUST00000051053; ENSMUSP00000056765; ENSMUSG00000044949.
GeneIDi327900.
KEGGimmu:327900.
UCSCiuc007ijr.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK076953 mRNA. Translation: BAC36536.1.
AL662780, AL669844 Genomic DNA. Translation: CAM22518.1.
AL669844, AL662780 Genomic DNA. Translation: CAI25521.1.
BC057026 mRNA. Translation: AAH57026.1.
CCDSiCCDS24527.1.
RefSeqiNP_776145.2. NM_173784.3.
UniGeneiMm.260956.

3D structure databases

ProteinModelPortaliQ6PGH0.
SMRiQ6PGH0. Positions 14-141, 149-227.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000056765.

PTM databases

iPTMnetiQ6PGH0.
PhosphoSiteiQ6PGH0.
SwissPalmiQ6PGH0.

Proteomic databases

MaxQBiQ6PGH0.
PaxDbiQ6PGH0.
PeptideAtlasiQ6PGH0.
PRIDEiQ6PGH0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000051053; ENSMUSP00000056765; ENSMUSG00000044949.
GeneIDi327900.
KEGGimmu:327900.
UCSCiuc007ijr.1. mouse.

Organism-specific databases

CTDi92181.
MGIiMGI:2444752. Ubtd2.

Phylogenomic databases

eggNOGiKOG0013. Eukaryota.
ENOG410XRPV. LUCA.
GeneTreeiENSGT00390000006816.
HOGENOMiHOG000231205.
HOVERGENiHBG080179.
InParanoidiQ6PGH0.
OMAiMIEEKGD.
OrthoDBiEOG091G0FKF.
PhylomeDBiQ6PGH0.
TreeFamiTF323925.

Miscellaneous databases

PROiQ6PGH0.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000044949.
CleanExiMM_UBTD2.

Family and domain databases

InterProiIPR032752. UBD.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF16455. UBD. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiUBTD2_MOUSE
AccessioniPrimary (citable) accession number: Q6PGH0
Secondary accession number(s): A2AAY6, Q8C5Y1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.