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Q6PE26

- Q6PE26_DANRE

UniProt

Q6PE26 - Q6PE26_DANRE

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Protein
Submitted name: Calr protein
Gene
calr3a, calr
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro

GO - Biological processi

  1. protein folding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

ChaperoneUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Calr proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:calr3aImported
Synonyms:calrImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 22

Organism-specific databases

ZFINiZDB-GENE-000208-17. calr3a.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the calreticulin family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00430000030841.
HOVERGENiHBG005407.
InParanoidiQ6PE26.
KOiK08057.
OMAiKNWVYSE.
TreeFamiTF338438.

Family and domain databases

Gene3Di2.60.120.200. 2 hits.
InterProiIPR001580. Calret/calnex.
IPR018124. Calret/calnex_CS.
IPR009169. Calreticulin.
IPR009033. Calreticulin/calnexin_P_dom.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
[Graphical view]
PANTHERiPTHR11073. PTHR11073. 1 hit.
PfamiPF00262. Calreticulin. 1 hit.
[Graphical view]
PIRSFiPIRSF002356. Calreticulin. 1 hit.
PRINTSiPR00626. CALRETICULIN.
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF63887. SSF63887. 1 hit.
PROSITEiPS00803. CALRETICULIN_1. 1 hit.
PS00804. CALRETICULIN_2. 1 hit.
PS00805. CALRETICULIN_REPEAT. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PE26-1 [UniParc]FASTAAdd to Basket

« Hide

MRITAAVCFI SALAFIAHAD VYFKEQFLDG DGWKSRWVES KHKSDYGQWK    50
LTSGKFYGDA ELDKGLQTSQ DARFYALSSR FDSFSNEGKT LVIQFTVKHE 100
QKIDCGGGYV KVFPAEMDQT EMHGESQYYI MFGPDICGYS TKKVHVIFNY 150
KGQNHLIKKD IKCKDDELTH LYTLILRPDQ TYEVKIDNEK VESGSLEEDW 200
DFLPPKKIKD PEAKKPDDWD DRAKIDDPED TKPEDWDKPE NIPDPDAKKP 250
DDWDEDMDGE WEPAMIPNPE YKGEWKPKQI DNPSYKGTWV HPEIDNPEYA 300
ADDAIYKFDS IGVLGLDLWQ VKSGTIFDNF LITDDVEEAE KFGTDTWGAT 350
KGPEKKMKDQ QEEEERKKRE EEEKSKKDDN EEDEEDEDED EPEEDDHTEE 400
PPEEEEEGED DALPKDEL 418
Length:418
Mass (Da):48,540
Last modified:July 5, 2004 - v1
Checksum:i10D092CC380C7071
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR394531 Genomic DNA. No translation available.
CR751224 Genomic DNA. No translation available.
CU570881 Genomic DNA. No translation available.
BC058314 mRNA. Translation: AAH58314.1.
RefSeqiXP_005161645.1. XM_005161588.1.
UniGeneiDr.104606.

Genome annotation databases

EnsembliENSDART00000063525; ENSDARP00000063524; ENSDARG00000043276.
ENSDART00000111557; ENSDARP00000099564; ENSDARG00000043276.
GeneIDi30248.
KEGGidre:30248.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR394531 Genomic DNA. No translation available.
CR751224 Genomic DNA. No translation available.
CU570881 Genomic DNA. No translation available.
BC058314 mRNA. Translation: AAH58314.1 .
RefSeqi XP_005161645.1. XM_005161588.1.
UniGenei Dr.104606.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000063525 ; ENSDARP00000063524 ; ENSDARG00000043276 .
ENSDART00000111557 ; ENSDARP00000099564 ; ENSDARG00000043276 .
GeneIDi 30248.
KEGGi dre:30248.

Organism-specific databases

CTDi 811.
ZFINi ZDB-GENE-000208-17. calr3a.

Phylogenomic databases

GeneTreei ENSGT00430000030841.
HOVERGENi HBG005407.
InParanoidi Q6PE26.
KOi K08057.
OMAi KNWVYSE.
TreeFami TF338438.

Family and domain databases

Gene3Di 2.60.120.200. 2 hits.
InterProi IPR001580. Calret/calnex.
IPR018124. Calret/calnex_CS.
IPR009169. Calreticulin.
IPR009033. Calreticulin/calnexin_P_dom.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
[Graphical view ]
PANTHERi PTHR11073. PTHR11073. 1 hit.
Pfami PF00262. Calreticulin. 1 hit.
[Graphical view ]
PIRSFi PIRSF002356. Calreticulin. 1 hit.
PRINTSi PR00626. CALRETICULIN.
SUPFAMi SSF49899. SSF49899. 1 hit.
SSF63887. SSF63887. 1 hit.
PROSITEi PS00803. CALRETICULIN_1. 1 hit.
PS00804. CALRETICULIN_2. 1 hit.
PS00805. CALRETICULIN_REPEAT. 3 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: KidneyImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  3. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiQ6PE26_DANRE
AccessioniPrimary (citable) accession number: Q6PE26
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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