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Q6PE26 (Q6PE26_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the calreticulin family. RuleBase RU003839

Ontologies

Keywords
   Cellular componentEndoplasmic reticulum RuleBase RU003839
   Molecular functionChaperone RuleBase RU003839
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processprotein folding

Inferred from electronic annotation. Source: InterPro

   Cellular_componentendoplasmic reticulum

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functioncalcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6PE26 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 10D092CC380C7071

FASTA41848,540
        10         20         30         40         50         60 
MRITAAVCFI SALAFIAHAD VYFKEQFLDG DGWKSRWVES KHKSDYGQWK LTSGKFYGDA 

        70         80         90        100        110        120 
ELDKGLQTSQ DARFYALSSR FDSFSNEGKT LVIQFTVKHE QKIDCGGGYV KVFPAEMDQT 

       130        140        150        160        170        180 
EMHGESQYYI MFGPDICGYS TKKVHVIFNY KGQNHLIKKD IKCKDDELTH LYTLILRPDQ 

       190        200        210        220        230        240 
TYEVKIDNEK VESGSLEEDW DFLPPKKIKD PEAKKPDDWD DRAKIDDPED TKPEDWDKPE 

       250        260        270        280        290        300 
NIPDPDAKKP DDWDEDMDGE WEPAMIPNPE YKGEWKPKQI DNPSYKGTWV HPEIDNPEYA 

       310        320        330        340        350        360 
ADDAIYKFDS IGVLGLDLWQ VKSGTIFDNF LITDDVEEAE KFGTDTWGAT KGPEKKMKDQ 

       370        380        390        400        410 
QEEEERKKRE EEEKSKKDDN EEDEEDEDED EPEEDDHTEE PPEEEEEGED DALPKDEL 

« Hide

References

« Hide 'large scale' references
[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Kidney EMBL AAH58314.1.
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000099564 Ensembl ENSDARP00000063524.
[3]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000099564 Ensembl ENSDARP00000063524.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR394531 Genomic DNA. No translation available.
CR751224 Genomic DNA. No translation available.
CU570881 Genomic DNA. No translation available.
BC058314 mRNA. Translation: AAH58314.1.
RefSeqXP_005161645.1. XM_005161588.1.
UniGeneDr.104606.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000063525; ENSDARP00000063524; ENSDARG00000043276.
ENSDART00000111557; ENSDARP00000099564; ENSDARG00000043276.
GeneID30248.
KEGGdre:30248.

Organism-specific databases

CTD811.
ZFINZDB-GENE-000208-17. calr3a.

Phylogenomic databases

GeneTreeENSGT00430000030841.
HOVERGENHBG005407.
InParanoidQ6PE26.
KOK08057.
OMAKNWVYSE.
TreeFamTF338438.

Family and domain databases

Gene3D2.60.120.200. 2 hits.
InterProIPR001580. Calret/calnex.
IPR018124. Calret/calnex_CS.
IPR009169. Calreticulin.
IPR009033. Calreticulin/calnexin_P_dom.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
[Graphical view]
PANTHERPTHR11073. PTHR11073. 1 hit.
PfamPF00262. Calreticulin. 1 hit.
[Graphical view]
PIRSFPIRSF002356. Calreticulin. 1 hit.
PRINTSPR00626. CALRETICULIN.
SUPFAMSSF49899. SSF49899. 1 hit.
SSF63887. SSF63887. 1 hit.
PROSITEPS00803. CALRETICULIN_1. 1 hit.
PS00804. CALRETICULIN_2. 1 hit.
PS00805. CALRETICULIN_REPEAT. 3 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6PE26_DANRE
AccessionPrimary (citable) accession number: Q6PE26
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)