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Protein

60S ribosomal protein L10

Gene

Rpl10

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Component of the large ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

  • liver regeneration Source: RGD
  • ribosomal large subunit assembly Source: GO_Central
  • translation Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L10
Gene namesi
Name:Rpl10
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi621178. Rpl10.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001471102 – 21460S ribosomal protein L10Add BLAST213

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei32CitrullineBy similarity1
Cross-linki175Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Cross-linki188Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)By similarity

Post-translational modificationi

Citrullinated by PADI4.By similarity

Keywords - PTMi

Citrullination, Isopeptide bond, Ubl conjugation

Proteomic databases

PaxDbiQ6PDV7.
PRIDEiQ6PDV7.

PTM databases

iPTMnetiQ6PDV7.
PhosphoSitePlusiQ6PDV7.

Expressioni

Gene expression databases

BgeeiENSRNOG00000056765.
GenevisibleiQ6PDV7. RN.

Interactioni

Subunit structurei

Component of the large ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (28S, 5.8S and 5S).By similarity

Protein-protein interaction databases

IntActiQ6PDV7. 1 interactor.
MINTiMINT-4132586.
STRINGi10116.ENSRNOP00000053123.

Structurei

3D structure databases

ProteinModelPortaliQ6PDV7.
SMRiQ6PDV7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0857. Eukaryota.
COG0197. LUCA.
GeneTreeiENSGT00390000003897.
HOGENOMiHOG000223754.
HOVERGENiHBG002287.
InParanoidiQ6PDV7.
KOiK02866.
OMAiPYTRKEY.
OrthoDBiEOG091G0H9M.
PhylomeDBiQ6PDV7.
TreeFamiTF300082.

Family and domain databases

CDDicd01433. Ribosomal_L16_L10e. 1 hit.
Gene3Di3.90.1170.10. 1 hit.
InterProiView protein in InterPro
IPR001197. Ribosomal_L10e.
IPR016180. Ribosomal_L10e/L16.
IPR018255. Ribosomal_L10e_CS.
PANTHERiPTHR11726. PTHR11726. 1 hit.
PfamiView protein in Pfam
PF00252. Ribosomal_L16. 1 hit.
PIRSFiPIRSF005590. Ribosomal_L10. 1 hit.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR00279. uL16_euk_arch. 1 hit.
PROSITEiView protein in PROSITE
PS01257. RIBOSOMAL_L10E. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6PDV7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIFDLGRKK AKVDEFPLCG
60 70 80 90 100
HMVSDEYEQL SSEALEAARI CANKYMVKSC GKDGFHIRVR LHPFHVIRIN
110 120 130 140 150
KMLSCAGADR LQTGMRGAFG KPQGTVARVH IGQVIMSIRT KLQNKEHVIE
160 170 180 190 200
ALRRAKFKFP GRQKIHISKK WGFTKFNADE FEDMVAEKRL IPDGCGVKYI
210
PNRGPLDKWR ALHS
Length:214
Mass (Da):24,604
Last modified:January 23, 2007 - v3
Checksum:i0860CECC91DF74FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X87106 mRNA. Translation: CAA60587.1.
BC058467 mRNA. Translation: AAH58467.1.
PIRiJC4911.
RefSeqiNP_112362.1. NM_031100.1.
UniGeneiRn.102157.

Genome annotation databases

EnsembliENSRNOT00000083951; ENSRNOP00000070105; ENSRNOG00000056765.
GeneIDi81764.
KEGGirno:81764.

Similar proteinsi

Entry informationi

Entry nameiRL10_RAT
AccessioniPrimary (citable) accession number: Q6PDV7
Secondary accession number(s): P45634
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: January 23, 2007
Last modified: September 27, 2017
This is version 104 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families