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Q6PD36 (Q6PD36_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Nptxr EMBL AAH58962.2
OrganismMus musculus (Mouse) EMBL AAH58962.2
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length320 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q6PD36 [UniParc].

Last modified April 3, 2007. Version 2.
Checksum: 8E69E92BE2D5621E

FASTA32034,983
        10         20         30         40         50         60 
MADGAWDSPA LLLELEDAVR ALRDRIERIE QELPARGNIS SAPAPAMPTA LHSKMDELEG 

        70         80         90        100        110        120 
QLLAKVLALE KERAALSHGS HQQRQEVEKE LNALQGRVAE LEHGSSAYSP PDAFKVSIPI 

       130        140        150        160        170        180 
RNNYMYARVR KALPELYAFT ACMWLRSRSG GSGQGTPFSY SVPGQANEIV LLEAGLEPME 

       190        200        210        220        230        240 
LLINDKVAQL PLSLKDSNWH HICISWTTRD GLWSAYQDGE LRGSGENLAA WHPIKPHGIL 

       250        260        270        280        290        300 
ILGQEQDTLG GRFDATQAFV GDIAQFNLWD HALTPAQVLG MANCTGPLMG NVLPWEDKLV 

       310        320 
EAFGGAKKAA FDVCKGRAKA 

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6 EMBL AAH58962.2.
Tissue: Brain EMBL AAH58962.2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC058962 mRNA. Translation: AAH58962.2.
BC098199 mRNA. Translation: AAH98199.2.
RefSeqNP_109614.2. NM_030689.4.
UniGeneMm.38438.

3D structure databases

ProteinModelPortalQ6PD36.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID73340.
KEGGmmu:73340.

Organism-specific databases

CTD23467.

Phylogenomic databases

HOVERGENHBG003608.

Gene expression databases

GenevestigatorQ6PD36.

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR001759. Pentaxin.
[Graphical view]
PfamPF00354. Pentaxin. 1 hit.
[Graphical view]
PRINTSPR00895. PENTAXIN.
SMARTSM00159. PTX. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
PROSITEPS00289. PENTAXIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio338015.

Entry information

Entry nameQ6PD36_MOUSE
AccessionPrimary (citable) accession number: Q6PD36
Secondary accession number(s): Q4QQM8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: April 3, 2007
Last modified: June 11, 2014
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)