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Protein
Submitted name:

Nptxr protein

Gene

Nptxr

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Nptxr proteinImported
Gene namesi
Name:NptxrImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1920590. Nptxr.

Expressioni

Gene expression databases

GenevestigatoriQ6PD36.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG003608.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001759. Pentaxin.
IPR030476. Pentaxin_CS.
[Graphical view]
PfamiPF00354. Pentaxin. 1 hit.
[Graphical view]
PRINTSiPR00895. PENTAXIN.
SMARTiSM00159. PTX. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS00289. PENTAXIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PD36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADGAWDSPA LLLELEDAVR ALRDRIERIE QELPARGNIS SAPAPAMPTA
60 70 80 90 100
LHSKMDELEG QLLAKVLALE KERAALSHGS HQQRQEVEKE LNALQGRVAE
110 120 130 140 150
LEHGSSAYSP PDAFKVSIPI RNNYMYARVR KALPELYAFT ACMWLRSRSG
160 170 180 190 200
GSGQGTPFSY SVPGQANEIV LLEAGLEPME LLINDKVAQL PLSLKDSNWH
210 220 230 240 250
HICISWTTRD GLWSAYQDGE LRGSGENLAA WHPIKPHGIL ILGQEQDTLG
260 270 280 290 300
GRFDATQAFV GDIAQFNLWD HALTPAQVLG MANCTGPLMG NVLPWEDKLV
310 320
EAFGGAKKAA FDVCKGRAKA
Length:320
Mass (Da):34,983
Last modified:April 3, 2007 - v2
Checksum:i8E69E92BE2D5621E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC058962 mRNA. Translation: AAH58962.2.
BC098199 mRNA. Translation: AAH98199.2.
RefSeqiNP_109614.2. NM_030689.4.
UniGeneiMm.38438.

Genome annotation databases

GeneIDi73340.
KEGGimmu:73340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC058962 mRNA. Translation: AAH58962.2.
BC098199 mRNA. Translation: AAH98199.2.
RefSeqiNP_109614.2. NM_030689.4.
UniGeneiMm.38438.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi73340.
KEGGimmu:73340.

Organism-specific databases

CTDi23467.
MGIiMGI:1920590. Nptxr.

Phylogenomic databases

HOVERGENiHBG003608.

Miscellaneous databases

NextBioi338015.
SOURCEiSearch...

Gene expression databases

GenevestigatoriQ6PD36.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001759. Pentaxin.
IPR030476. Pentaxin_CS.
[Graphical view]
PfamiPF00354. Pentaxin. 1 hit.
[Graphical view]
PRINTSiPR00895. PENTAXIN.
SMARTiSM00159. PTX. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS00289. PENTAXIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6Imported.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ6PD36_MOUSE
AccessioniPrimary (citable) accession number: Q6PD36
Secondary accession number(s): Q4QQM8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: April 3, 2007
Last modified: April 29, 2015
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.