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Protein
Submitted name:

General transcription factor II I repeat domain-containing 1

Gene

Gtf2ird1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
General transcription factor II I repeat domain-containing 1Imported
Submitted name:
General transcription factor II-I repeat domain-containing protein 1Imported
Gene namesi
Name:Gtf2ird1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:1861942. Gtf2ird1.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000023079.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati119 – 213GTF2I-likePROSITE-ProRule annotationAdd BLAST95
Repeati342 – 436GTF2I-likePROSITE-ProRule annotationAdd BLAST95
Repeati556 – 650GTF2I-likePROSITE-ProRule annotationAdd BLAST95
Repeati681 – 775GTF2I-likePROSITE-ProRule annotationAdd BLAST95
Repeati778 – 872GTF2I-likePROSITE-ProRule annotationAdd BLAST95
Repeati881 – 975GTF2I-likePROSITE-ProRule annotationAdd BLAST95

Sequence similaritiesi

Belongs to the TFII-I family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IEPZ. Eukaryota.
ENOG41100H8. LUCA.
GeneTreeiENSGT00530000063863.
HOVERGENiHBG051855.

Family and domain databases

Gene3Di3.90.1460.10. 6 hits.
InterProiView protein in InterPro
IPR004212. GTF2I.
IPR016659. TF_II-I.
PfamiView protein in Pfam
PF02946. GTF2I. 6 hits.
PIRSFiPIRSF016441. TF_II-I. 3 hits.
SUPFAMiSSF117773. SSF117773. 6 hits.
PROSITEiView protein in PROSITE
PS51139. GTF2I. 6 hits.

Sequencei

Sequence statusi: Complete.

Q6PD35-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALLGKHCDI PTNGCGSERW NSTFARKDEL INSLVSALDS MCSALSKLNT
60 70 80 90 100
EVACVAVHNE SVFVMGTEKG RVFLNTRKEL QSDFLRFCRG PLWNDPEAGH
110 120 130 140 150
PKKVQRCEGG GRSLPRSSLE QCSDVYLLQK MVEEVFDVLY SEAMGRATVV
160 170 180 190 200
PLPYERLLRE PGLLAVQGLP EGLAFRRPAE YDPKALMAIL EHSHRIRFKL
210 220 230 240 250
RRPPDDGGQD TKALVEMNGI SLLPKGSRDC GLHGQASKVA PQDLTPTATP
260 270 280 290 300
SSMANFLYST SMPNHTIREL KQEVPTCPLT PSDLGMGWPV PEPHVPSTQD
310 320 330 340 350
FSDCCGQTPA GPAGPLIQNV HASKRILFSI VHDKSEKWDP FIKEMEDINT
360 370 380 390 400
LRECVQILFN SRYAEALGLD HMVPVPYRKI ACDPEAVEIV GIPDKIPFKR
410 420 430 440 450
PCTYGVPKLK RILEERHSIH FIIKRMFDER IFTGNKFTKD PMKLEPASPP
460 470 480 490 500
EDTSTEVCRD SMLDLAGTAW SDMSSVSEDC GPGTSGEIAM LRPIKIEPEE
510 520 530 540 550
LDIIQVTVSD PSPTSEEMTD SLPGHLPSED SGYGMEMPAD KGPSEEPWSE
560 570 580 590 600
ERPAEESPGD VIRPLRKQVE MLFNTKYAKA IGTSEPVKVP YSKFLMHPEE
610 620 630 640 650
LFVLGLPEGI SLRRPNCFGI AKLRKILEAS NSIQFVIKRP ELLTDGVKEP
660 670 680 690 700
VLDTQERDSW DRLVDETPKR QGLQENYNTR LSRIDIANTL REQVQDLFNK
710 720 730 740 750
KYGEALGIKY PVQVPYKRIK SNPGSVIIEG LPPGIPFRKP CTFGSQNLER
760 770 780 790 800
ILSVADKIKF TVTRPFQGLI PKPDEDDANR LGEKVILREQ VKELFNEKYG
810 820 830 840 850
EALGLNRPVL VPYKLIRDSP DAVEVKGLPD DIPFRNPNTY DIHRLEKILK
860 870 880 890 900
AREHVRMVII NQLQPFAEVC NDPKVPEEDD SNKLGKKVIL REQVKELFNE
910 920 930 940 950
KYGEALGLNR PVLVPYKLIR DSPDAVEVKG LPDDIPFRNP NTYDIHRLEK
960 970 980 990 1000
ILKAREHVRM VIINQLQPFG DVCNNAKVPA KDNIPKRKRK RVSEGNSVSS
1010 1020 1030 1040
SSSSSSSSSN PESVASTNQI SLVQWPVYMV DYSGLNVQLP GPLDY
Length:1,045
Mass (Da):117,135
Last modified:July 5, 2004 - v1
Checksum:i77A6ADA54EC636E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC167419 Genomic DNA. No translation available.
BC050822 mRNA. Translation: AAH50822.1.
BC057091 mRNA. Translation: AAH57091.1.
BC058964 mRNA. Translation: AAH58964.1.
AK147196 mRNA. Translation: BAE27754.1.
RefSeqiNP_001074933.1. NM_001081464.2.
NP_001074934.1. NM_001081465.1.
NP_001074935.1. NM_001081466.2.
NP_001074936.1. NM_001081467.2.
NP_001074937.1. NM_001081468.2.
NP_001074938.1. NM_001081469.2.
NP_001074939.1. NM_001081470.2.
NP_001231865.1. NM_001244936.1.
NP_065064.2. NM_020331.3.
UniGeneiMm.332735.

Genome annotation databases

EnsembliENSMUST00000111244; ENSMUSP00000106875; ENSMUSG00000023079.
ENSMUST00000171794; ENSMUSP00000129392; ENSMUSG00000023079.
GeneIDi57080.
UCSCiuc008zvt.1. mouse.

Similar proteinsi

Entry informationi

Entry nameiQ6PD35_MOUSE
AccessioniPrimary (citable) accession number: Q6PD35
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: August 30, 2017
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported