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Protein

Tumor protein D54

Gene

Tpd52l2

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Tumor protein D54
Alternative name(s):
Tumor protein D52-like 2
Gene namesi
Name:Tpd52l2
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi735167 Tpd52l2

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001857471 – 220Tumor protein D54Add BLAST220

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineBy similarity1
Modified residuei3PhosphoserineBy similarity1
Modified residuei12PhosphoserineCombined sources1
Modified residuei19PhosphoserineBy similarity1
Modified residuei96PhosphoserineBy similarity1
Modified residuei149PhosphoserineBy similarity1
Modified residuei168PhosphoserineBy similarity1
Modified residuei175PhosphoserineBy similarity1
Modified residuei177PhosphothreonineBy similarity1
Modified residuei180PhosphoserineCombined sources1
Modified residuei187PhosphothreonineBy similarity1
Modified residuei206PhosphoserineBy similarity1
Modified residuei209PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ6PCT3
PRIDEiQ6PCT3

PTM databases

iPTMnetiQ6PCT3
PhosphoSitePlusiQ6PCT3

Expressioni

Gene expression databases

BgeeiENSRNOG00000015122
GenevisibleiQ6PCT3 RN

Interactioni

Subunit structurei

Forms a homodimer or heterodimer with other members of the family. Interacts with MAL2 (By similarity).By similarity

Protein-protein interaction databases

BioGridi255374, 1 interactor
STRINGi10116.ENSRNOP00000020374

Structurei

3D structure databases

ProteinModelPortaliQ6PCT3
SMRiQ6PCT3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili40 – 82Sequence analysisAdd BLAST43

Sequence similaritiesi

Belongs to the TPD52 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG4010 Eukaryota
ENOG4111M9H LUCA
GeneTreeiENSGT00390000015988
HOGENOMiHOG000231968
HOVERGENiHBG058643
InParanoidiQ6PCT3
OMAiRARPFSH
OrthoDBiEOG091G0MLN
PhylomeDBiQ6PCT3

Family and domain databases

InterProiView protein in InterPro
IPR007327 TPD52
PANTHERiPTHR19307 PTHR19307, 1 hit
PfamiView protein in Pfam
PF04201 TPD52, 2 hits

Sequencei

Sequence statusi: Complete.

Q6PCT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSASQDINL NSPNKGVLSD FMTDVPVDPG VVHRTPAVEG LTEVEEEELR
60 70 80 90 100
AELAKVEEEI VTLRQVLAAK ERHCGELKRR LGLSTLGELK QNLSRSWHDV
110 120 130 140 150
QGSTAYVKTS EKLGEWNEKV TQSDLYKKTQ ETLSQAGQKT SAALSTMGSA
160 170 180 190 200
ISRKLGDMSS YSIRHSISMP VMRNSATFKS FEDRVGTIKS KVVGGRENGS
210 220
DTLPSSPGSG DQTLPDHAPF
Length:220
Mass (Da):23,992
Last modified:July 5, 2004 - v1
Checksum:i505408FBFFABAFD8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC059167 mRNA Translation: AAH59167.1
RefSeqiNP_942039.1, NM_198744.2
UniGeneiRn.1207
Rn.234320

Genome annotation databases

EnsembliENSRNOT00000020373; ENSRNOP00000020374; ENSRNOG00000015122
GeneIDi296480
KEGGirno:296480
UCSCiRGD:735167 rat

Similar proteinsi

Entry informationi

Entry nameiTPD54_RAT
AccessioniPrimary (citable) accession number: Q6PCT3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 12, 2005
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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