Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q6PCS8

- Q6PCS8_MOUSE

UniProt

Q6PCS8 - Q6PCS8_MOUSE

Protein
Submitted name:

Protein Zbtb40

Gene

Zbtb40

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 104 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. cellular response to DNA damage stimulus Source: UniProtKB

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Zbtb40Imported
    Submitted name:
    Zinc finger and BTB domain containing 40Imported
    Gene namesi
    Name:Zbtb40Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 4

    Organism-specific databases

    MGIiMGI:2682254. Zbtb40.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB

    Keywords - Cellular componenti

    NucleusSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ6PCS8.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 BTB (POZ) domain.UniRule annotation
    Contains BTB (POZ) domain.SAAS annotation

    Keywords - Domaini

    RepeatSAAS annotation, Zinc-fingerSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00740000115612.
    HOGENOMiHOG000143421.
    HOVERGENiHBG058697.
    InParanoidiQ6PCS8.
    KOiK10512.
    OMAiCVTQLRP.
    OrthoDBiEOG7BGHJW.
    TreeFamiTF350897.

    Family and domain databases

    Gene3Di3.30.160.60. 7 hits.
    3.30.710.10. 1 hit.
    InterProiIPR000210. BTB/POZ-like.
    IPR011333. BTB/POZ_fold.
    IPR013069. BTB_POZ.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF00651. BTB. 1 hit.
    PF00096. zf-C2H2. 1 hit.
    [Graphical view]
    SMARTiSM00225. BTB. 1 hit.
    SM00355. ZnF_C2H2. 13 hits.
    [Graphical view]
    SUPFAMiSSF54695. SSF54695. 1 hit.
    PROSITEiPS50097. BTB. 1 hit.
    PS00028. ZINC_FINGER_C2H2_1. 12 hits.
    PS50157. ZINC_FINGER_C2H2_2. 11 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6PCS8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MELPSYSQQL LLQLYALCKE QRFCDCTISV GNIYFRAHKP VLAAASLLFK     50
    TLLDSTDAIS IDASVVSPEE FALLLEMTYT GKLPVGKHNF SKIISLADSL 100
    QMFDVAVSCK NLLTNLVNCS VQGQVVRDVS VLSSEAGNKE SEKPQVEALS 150
    SEGAEEPSSS PEVSAVPAGP EKAKTQDVIN IATQEINADP PVAQEVQVAA 200
    EITGATPHTA EVCSPSPVGQ IPSETKEVNT EAECETKQDQ LTLLLEHESV 250
    FSDAALLTPD TLRRLAGCSE IEGPQKETII ECLTSEGGSS AFQRILDKVH 300
    DGSLDVQVAL SLVRLYQEST PAEKVSQIQP EGSAGEGKTL SVLLLEHKED 350
    LIQCVTQLRP IVEFLETAKE EFLPDSEKRV IQSCCEGRTP KEMIENLLHR 400
    VTEEKTLPAK SLVKLLQAVR TAFPNLDLLL DNLQKGAGSA GTTGLARVSC 450
    ESEWTDEPRP VCIPADRVDG SSPSPDAYGA ELLRKYHENL SEILIDNQVL 500
    LKVISRMQSL APGDREVMQT LVKQGSGSGG FSSLMLAALE RQTLSATAIW 550
    QLLLAVEETE TRPLNLLLEE VGKEPGAGAF FRAVTAPEST VLEAILRHSK 600
    LLREAIQQTA GCERLSSEEE HLAETVQEML SISSETVSPE ASLRAVLSKA 650
    MEKSVSASVV CHLLCSVHKS FPGLQPLMQE LAHVGFLTKE SGEERWKVTD 700
    GLHPGAKDKV EEVAKATGED CQANEQKEQG EPGPVPEQPE KDTSASPDSA 750
    KKSFVCKACD KSFHFYCRLK VHMKRCRVAK SRQVQSEEGS ETKGSEKGLE 800
    KQQPDARGTG GEPDAPKKKK KRLPVTCDLC GREFAHASGM QYHKLTEHFD 850
    EKPFSCEECG AKFAANSTLK NHLRLHTGDR PFMCKHCLMT FTQASALAYH 900
    TKKKHSEGKM YACQYCDAVF AQSIELSRHV RTHTGDKPYV CRDCGKGFRQ 950
    ANGLSIHLHT FHTDIEDPYD CKKCRMSFST LQDHRKHIHE VHAKEYHPCP 1000
    TCGKIFSAPS MLERHMVTHV GGKPFSCGIC NKAYQQLSGL WYHNRTHHPD 1050
    VFAAQNHRSP KFSSLQCSSC DKTFSNTVEH KKHIKTEHTD VKFHECDQCK 1100
    ELFPTPALLQ VHVKCQHSGS QPFRCLYCAA TFRFPGALQH HVTTEHFKQS 1150
    ESTFPCELCG ELFTSQAQLD SHLESEHPKV AGTESQAAAS RMVQVIRAPE 1200
    PAAPAEQVIT LEETQLAGSQ VFVTLPDSQT SQNSSELVAV TVEDLLDGTV 1250
    TLICGEAK 1258
    Length:1,258
    Mass (Da):138,167
    Last modified:July 5, 2004 - v1
    Checksum:i469EA921CEE4B821
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL627214 Genomic DNA. No translation available.
    AL671011 Genomic DNA. No translation available.
    BC059177 mRNA. Translation: AAH59177.1.
    RefSeqiNP_937891.1. NM_198248.1.
    UniGeneiMm.31068.

    Genome annotation databases

    EnsembliENSMUST00000049583; ENSMUSP00000061899; ENSMUSG00000060862.
    GeneIDi230848.
    KEGGimmu:230848.
    UCSCiuc008vit.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL627214 Genomic DNA. No translation available.
    AL671011 Genomic DNA. No translation available.
    BC059177 mRNA. Translation: AAH59177.1 .
    RefSeqi NP_937891.1. NM_198248.1.
    UniGenei Mm.31068.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000049583 ; ENSMUSP00000061899 ; ENSMUSG00000060862 .
    GeneIDi 230848.
    KEGGi mmu:230848.
    UCSCi uc008vit.1. mouse.

    Organism-specific databases

    CTDi 9923.
    MGIi MGI:2682254. Zbtb40.

    Phylogenomic databases

    GeneTreei ENSGT00740000115612.
    HOGENOMi HOG000143421.
    HOVERGENi HBG058697.
    InParanoidi Q6PCS8.
    KOi K10512.
    OMAi CVTQLRP.
    OrthoDBi EOG7BGHJW.
    TreeFami TF350897.

    Miscellaneous databases

    NextBioi 380210.
    PROi Q6PCS8.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q6PCS8.

    Family and domain databases

    Gene3Di 3.30.160.60. 7 hits.
    3.30.710.10. 1 hit.
    InterProi IPR000210. BTB/POZ-like.
    IPR011333. BTB/POZ_fold.
    IPR013069. BTB_POZ.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF00651. BTB. 1 hit.
    PF00096. zf-C2H2. 1 hit.
    [Graphical view ]
    SMARTi SM00225. BTB. 1 hit.
    SM00355. ZnF_C2H2. 13 hits.
    [Graphical view ]
    SUPFAMi SSF54695. SSF54695. 1 hit.
    PROSITEi PS50097. BTB. 1 hit.
    PS00028. ZINC_FINGER_C2H2_1. 12 hits.
    PS50157. ZINC_FINGER_C2H2_2. 11 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6Imported.
      Tissue: BrainImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    3. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ6PCS8_MOUSE
    AccessioniPrimary (citable) accession number: Q6PCS8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 104 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3