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Q6PCM9 (Q6PCM9_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Notch2 protein EMBL AAH59256.1
Gene names
Name:Notch2 MGI 97364
OrganismMus musculus (Mouse) EMBL AAH59256.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length529 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q6PCM9 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: C26EAAB89E68A966

FASTA52956,426
        10         20         30         40         50         60 
MYGKVDSVRG RNLEGMVAEL INCQADVNAV DDHGKSALHW AAAVNNVEAT FLLLKNGANR 

        70         80         90        100        110        120 
DMQDNKEETP LFLAAREGSY EAAKILLDHF ANRDITDHMD RLPRDVARDR MHHDIVRLLD 

       130        140        150        160        170        180 
EYNVTPSPPG TVLTSALSPV LCGPNRSFLS LKHTPMGKKA RRPNTKSTMP TSLPNLAKEA 

       190        200        210        220        230        240 
KDAKGSRRKK CLNEKVQLSE SSVTLSPVDS LESPHTYVSD ATSSPMITSP GILQASPTPL 

       250        260        270        280        290        300 
LAAAAPAAPV HTQHALSFSN LHDMQPLAPG ASTVLPSVSQ LLSHHHIAPP GSSSAGSLGR 

       310        320        330        340        350        360 
LHPVPVPADW MNRVEMNETQ YSEMFGMVLA PAEGAHPGIA APQSRPPEGK HMSTQREPLP 

       370        380        390        400        410        420 
PIVTFQLIPK GSIAQAAGAP QTQSSCPPAV AGPLPSMYQI PEMPRLPSVA FPPTMMPQQE 

       430        440        450        460        470        480 
GQVAQTIVPT YHPFPASVGK YPTPPSQHSY ASSNAAERTP SHGGHLQGEH PYLTPSPESP 

       490        500        510        520 
DQWSSSSPHS ASDWSDVTTS PTPGGGGGGQ RGPGTHMSEP PHSNMQVYA

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6 EMBL AAH59256.1.
Tissue: Brain EMBL AAH59256.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC059256 mRNA. Translation: AAH59256.1.
IPIIPI01008503.
UniGeneMm.485843.

3D structure databases

ProteinModelPortalQ6PCM9.
SMRQ6PCM9. Positions 13-128.
ModBaseSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000078741.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:97364. Notch2.

Phylogenomic databases

HOVERGENHBG062747.
InParanoidQ6PCM9.

Gene expression databases

GenevestigatorQ6PCM9.

Family and domain databases

Gene3D1.25.40.20. 1 hit.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR024600. DUF3454_notch.
IPR022336. Notch_2.
[Graphical view]
PfamPF12796. Ank_2. 1 hit.
PF11936. DUF3454. 1 hit.
[Graphical view]
PRINTSPR01985. NOTCH2.
SMARTSM00248. ANK. 2 hits.
[Graphical view]
SUPFAMSSF48403. ANK. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSNOTCH2. mouse.
SOURCESearch...

Entry information

Entry nameQ6PCM9_MOUSE
AccessionPrimary (citable) accession number: Q6PCM9
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 3, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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