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Protein
Submitted name:

Hippocalcin

Gene

hpca

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumSAAS annotation, Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HippocalcinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:hpcaImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 19

Organism-specific databases

ZFINiZDB-GENE-040426-1683. hpca.

Expressioni

Gene expression databases

BgeeiENSDARG00000018397.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000012565.

Structurei

3D structure databases

SMRiQ6PC34. Positions 5-185.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini40 – 5819EF-handInterPro annotationAdd
BLAST
Domaini60 – 9536EF-handInterPro annotationAdd
BLAST
Domaini96 – 13136EF-handInterPro annotationAdd
BLAST
Domaini144 – 17936EF-handInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG0044. Eukaryota.
COG5126. LUCA.
GeneTreeiENSGT00760000118820.
HOGENOMiHOG000233019.
HOVERGENiHBG108179.
OMAiFRENTEF.
PhylomeDBiQ6PC34.
TreeFamiTF300009.

Family and domain databases

Gene3Di1.10.238.10. 3 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
IPR028846. Recoverin.
[Graphical view]
PANTHERiPTHR23055. PTHR23055. 1 hit.
PfamiPF13499. EF-hand_7. 2 hits.
[Graphical view]
SMARTiSM00054. EFh. 3 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 3 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PC34-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKQNSKLRP EMLQDLRENT EFTDHELQEW YKGFLKDCPS GHLNVEEFKK
60 70 80 90 100
IYANFFPYGD ASKFAEHVFR TFDTNNDGTI DFREFIIALS VTSRGKLEQK
110 120 130 140 150
LKWAFSMYDL DGNGYISREE MLEIVQAIYK MVSSVMKMPE DESTPEKRTD
160 170 180 190
KIFRQMDLNN DGKLSLEEFI KGAKSDPSIV RLLQCDPSSA SQF
Length:193
Mass (Da):22,441
Last modified:July 5, 2004 - v1
Checksum:iEA7E90C4EA6B5E20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX293540 Genomic DNA. No translation available.
CR318628 Genomic DNA. No translation available.
BC059489 mRNA. Translation: AAH59489.1.
RefSeqiNP_957017.1. NM_200723.1.
UniGeneiDr.11184.

Genome annotation databases

EnsembliENSDART00000004034; ENSDARP00000012565; ENSDARG00000018397.
ENSDART00000165006; ENSDARP00000130908; ENSDARG00000018397.
GeneIDi393696.
KEGGidre:393696.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX293540 Genomic DNA. No translation available.
CR318628 Genomic DNA. No translation available.
BC059489 mRNA. Translation: AAH59489.1.
RefSeqiNP_957017.1. NM_200723.1.
UniGeneiDr.11184.

3D structure databases

SMRiQ6PC34. Positions 5-185.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000012565.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000004034; ENSDARP00000012565; ENSDARG00000018397.
ENSDART00000165006; ENSDARP00000130908; ENSDARG00000018397.
GeneIDi393696.
KEGGidre:393696.

Organism-specific databases

CTDi3208.
ZFINiZDB-GENE-040426-1683. hpca.

Phylogenomic databases

eggNOGiKOG0044. Eukaryota.
COG5126. LUCA.
GeneTreeiENSGT00760000118820.
HOGENOMiHOG000233019.
HOVERGENiHBG108179.
OMAiFRENTEF.
PhylomeDBiQ6PC34.
TreeFamiTF300009.

Gene expression databases

BgeeiENSDARG00000018397.

Family and domain databases

Gene3Di1.10.238.10. 3 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
IPR028846. Recoverin.
[Graphical view]
PANTHERiPTHR23055. PTHR23055. 1 hit.
PfamiPF13499. EF-hand_7. 2 hits.
[Graphical view]
SMARTiSM00054. EFh. 3 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 3 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6PC34_DANRE
AccessioniPrimary (citable) accession number: Q6PC34
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.