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Protein
Submitted name:

Zgc:73355

Gene

cox4i2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Zgc:73355Imported
Gene namesi
Name:cox4i2Imported
Synonyms:zgc:73355Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-040426-1775. cox4i2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei112 – 13221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ6PBL1.
PRIDEiQ6PBL1.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000095260.

Structurei

3D structure databases

ProteinModelPortaliQ6PBL1.
SMRiQ6PBL1. Positions 36-177.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4075. Eukaryota.
ENOG4111T97. LUCA.
HOGENOMiHOG000231486.
HOVERGENiHBG051087.
KOiK02263.
PhylomeDBiQ6PBL1.

Family and domain databases

Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6PBL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLCLTAGRLG GLLTRRGVAA FSSSSVKMAS HGHGDVIEQA DMSRPMYSDR
60 70 80 90 100
LDTPLPDRPY KDILSAADKS LKQKEKGPWN NLSNEEKIAL YRIMFNETFA
110 120 130 140 150
EMKKPTGEWK TVTAGILFFI GFTGLVVLWQ RLYVYPPQPH TFGDEWQAKQ
160 170
IKRMLDMKIN PVQGFAAKWD YEKGQWK
Length:177
Mass (Da):20,204
Last modified:July 5, 2004 - v1
Checksum:i6783D298B7239F46
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC059669 mRNA. Translation: AAH59669.1.
RefSeqiNP_957097.1. NM_200803.1.
UniGeneiDr.12760.

Genome annotation databases

GeneIDi393776.
KEGGidre:393776.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC059669 mRNA. Translation: AAH59669.1.
RefSeqiNP_957097.1. NM_200803.1.
UniGeneiDr.12760.

3D structure databases

ProteinModelPortaliQ6PBL1.
SMRiQ6PBL1. Positions 36-177.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000095260.

Proteomic databases

PaxDbiQ6PBL1.
PRIDEiQ6PBL1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi393776.
KEGGidre:393776.

Organism-specific databases

CTDi84701.
ZFINiZDB-GENE-040426-1775. cox4i2.

Phylogenomic databases

eggNOGiKOG4075. Eukaryota.
ENOG4111T97. LUCA.
HOGENOMiHOG000231486.
HOVERGENiHBG051087.
KOiK02263.
PhylomeDBiQ6PBL1.

Miscellaneous databases

NextBioi20814773.

Family and domain databases

Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Wild-typeImported.
    Tissue: EyeImported.

Entry informationi

Entry nameiQ6PBL1_DANRE
AccessioniPrimary (citable) accession number: Q6PBL1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 11, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.