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Protein

Immediate early response gene 5-like protein

Gene

ier5l

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Immediate early response gene 5-like protein
Gene namesi
Name:ier5l
ORF Names:TGas092c17.1
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-974858. ier5l.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 296296Immediate early response gene 5-like proteinPRO_0000334661Add
BLAST

Proteomic databases

PaxDbiQ6PBC9.

Expressioni

Gene expression databases

BgeeiENSXETG00000014109.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000030790.

Family & Domainsi

Sequence similaritiesi

Belongs to the IER family.Curated

Phylogenomic databases

eggNOGiENOG410J77W. Eukaryota.
ENOG410YHIY. LUCA.
HOGENOMiHOG000112999.
HOVERGENiHBG107988.
InParanoidiQ6PBC9.
OrthoDBiEOG091G0HLK.

Family and domain databases

InterProiIPR008653. IER.
[Graphical view]
PANTHERiPTHR15895. PTHR15895. 1 hit.
PfamiPF05760. IER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6PBC9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MECALDAQSL ISLSLRKIHS SRTQRGGIKL HKNLLVSYVL RNARQLYLSE
60 70 80 90 100
RYAELYRRQP FPQPMEECGA CDEPDIPELS PLQIPEEGED EMHQLPRIQN
110 120 130 140 150
GAELLEPLSS EEPLELPPCA HSPHPAKDPH SGFYSPAPSR GFCSSGDSGG
160 170 180 190 200
LGLPQCSHTT VLDLDTHVVT TVESGYLHQD CPCQGAPRPA LLTAPPKRKY
210 220 230 240 250
APAGYSYSGH GVAEEEEDVE PHFVPCKRGR YEDFCPQPLG EPTDSNNISN
260 270 280 290
LISIFGSGFS GLMSRQSEAE QSLNGHLCGK QALASLGAWT RAIVAF
Length:296
Mass (Da):32,359
Last modified:July 5, 2004 - v1
Checksum:i9CC9E8B8CDE75B8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR848131 mRNA. Translation: CAJ82483.1.
BC059766 mRNA. Translation: AAH59766.1.
RefSeqiNP_988888.1. NM_203557.1.
UniGeneiStr.6108.

Genome annotation databases

GeneIDi394483.
KEGGixtr:394483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR848131 mRNA. Translation: CAJ82483.1.
BC059766 mRNA. Translation: AAH59766.1.
RefSeqiNP_988888.1. NM_203557.1.
UniGeneiStr.6108.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000030790.

Proteomic databases

PaxDbiQ6PBC9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi394483.
KEGGixtr:394483.

Organism-specific databases

CTDi389792.
XenbaseiXB-GENE-974858. ier5l.

Phylogenomic databases

eggNOGiENOG410J77W. Eukaryota.
ENOG410YHIY. LUCA.
HOGENOMiHOG000112999.
HOVERGENiHBG107988.
InParanoidiQ6PBC9.
OrthoDBiEOG091G0HLK.

Gene expression databases

BgeeiENSXETG00000014109.

Family and domain databases

InterProiIPR008653. IER.
[Graphical view]
PANTHERiPTHR15895. PTHR15895. 1 hit.
PfamiPF05760. IER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiIER5L_XENTR
AccessioniPrimary (citable) accession number: Q6PBC9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.