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Protein
Submitted name:

Spag9 protein

Gene

Spag9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Spag9 proteinImported
Gene namesi
Name:Spag9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1918084. Spag9.

PTM / Processingi

Proteomic databases

PaxDbiQ6PA03.

Expressioni

Gene expression databases

BgeeiQ6PA03.
GenevisibleiQ6PA03. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000042271.

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili67 – 9428Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2077. Eukaryota.
ENOG410XQ19. LUCA.
HOVERGENiHBG024110.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q6PA03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QGETKMKNLP VPVYLRPLDE KDASMKLWCA VGVNLSGGKT RDGGSVVGAS
60 70 80 90 100
VFYKDIAGLD TEGSKQRSAS QSSLDKLDQE LKEQQKEFKN QEELSSQVWI
110 120 130 140 150
CTSTHSTTKV IIIDAVQPGN ILDSFTVCNS HVLCIASVPG ARETDYPAGE
160 170 180 190 200
ELSESGQVDK ASLCGSMTSN SSAEMDSLLG GITVVGCSTE GLTGAATSPS
210 220 230 240 250
TNGASPVIEK PPEMETENSE VDENIPTAEE ATEATEGNAG STEDTVDISQ
260 270 280 290 300
PGVYTEHVFT DPLGVQIPED LSPVFQSSND SDVYKDQISV LPNEQDLARE
310 320 330 340 350
EAQKMSSLLP TMWLGAQNGC LYVHSSVAQW RKCLHSIKLK DSILSIVHVK
360 370 380 390 400
GIVLVALADG TLAIFHRGVD GQWDLSNYHL LDLGRPHHSI RCMTVVHDKV
410 420 430 440 450
WCGYRNKIYV VQPKAMKIEK SFDAHPRKES QVRQLAWVGD GVWVSIRLDS
460 470 480 490 500
TLRLYHAHTY QHLQDVDIEP YVSKMLGTGK LGFSFVRITA LMVSCNRLWV
510 520 530 540 550
GTGNGVIISI PLTETVILHQ GRLLGLRANK TSGTPGNRPG SVIRVYGDEN
560 570 580 590 600
SDKVTPGTFI PYCSMAHAQL CFHGHRDAVK FFVAVPGQVI SPQSSSGGAD
610 620 630 640 650
LTADKAGSSA QEPSSQTPLK SMLVISGGEG YIDFRMGDEG GESELLGEDL
660 670
PLEPSVTKAE RSHLIVWQVM CGNE
Length:674
Mass (Da):72,919
Last modified:July 5, 2004 - v1
Checksum:iD5B5D5AA07FAE65E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC060506 mRNA. Translation: AAH60506.1.
RefSeqiNP_081845.2. NM_027569.2.
UniGeneiMm.260737.
Mm.479010.

Genome annotation databases

GeneIDi70834.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC060506 mRNA. Translation: AAH60506.1.
RefSeqiNP_081845.2. NM_027569.2.
UniGeneiMm.260737.
Mm.479010.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000042271.

Proteomic databases

PaxDbiQ6PA03.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi70834.

Organism-specific databases

CTDi9043.
MGIiMGI:1918084. Spag9.

Phylogenomic databases

eggNOGiKOG2077. Eukaryota.
ENOG410XQ19. LUCA.
HOVERGENiHBG024110.

Miscellaneous databases

ChiTaRSiSpag9. mouse.
NextBioi332372.
SOURCEiSearch...

Gene expression databases

BgeeiQ6PA03.
GenevisibleiQ6PA03. MM.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Olfactory epitheliumImported.

Entry informationi

Entry nameiQ6PA03_MOUSE
AccessioniPrimary (citable) accession number: Q6PA03
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 16, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.