Unreviewed, UniProtKB/TrEMBL Q6P9T1 (Q6P9T1_MOUSE)

Names and origin

Protein names

Submitted name:
    Sox17 protein EMBL AAH60612.1

Gene names

Name:

Sox17 MGI 107543

Organism

Mus musculus (Mouse) EMBL AAH60612.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

Protein attributes

Sequence length	176 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	protein destabilization Inferred from electronic annotation. Source: Compara protein stabilization Inferred from electronic annotation. Source: Compara
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro beta-catenin binding Inferred from electronic annotation. Source: Compara transcription factor binding Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6P9T1-1 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 4EAAA09212BE62BC	FASTA	176	19,378
	10 20 30 40 50 60 MSSPDAGYAS DDQSQPRSAQ PAVMAGLGPC PWAESLSPLG DVKVKGEVVA SSGAPAGTSG 70 80 90 100 110 120 RAKAESRIRR PMNAFMVWAK DERKRLAQQN PDLHNAELSK MLGKSWKALT LAEKRPFVEE 130 140 150 160 170 AERLRVQHMQ DHPNYKYRPR RRKQVKRMKR VEGGFLHALV EPQAGALGPE GGRSLP

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6 EMBL AAH60612.1. Tissue: Brain EMBL AAH60612.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC060612 mRNA. Translation: AAH60612.1.
IPI	IPI00121298.
UniGene	Mm.279103
3D structure databases
SMR	Q6P9T1. Positions 62-139.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6P9T1.
Genome annotation databases
Ensembl	ENSMUST00000027035; ENSMUSP00000027035; ENSMUSG00000025902; Mus musculus. [Genome view]
Organism-specific databases
MGI	MGI:107543. Sox17.
Phylogenomic databases
HOVERGEN	Q6P9T1.
InParanoid	Q6P9T1.
Gene expression databases
ArrayExpress	Q6P9T1.
Bgee	Q6P9T1.
Genevestigator	Q6P9T1.
Family and domain databases
InterPro	IPR000910. HMG_HMG1/HMG2. IPR009071. HMG_superfamily. [Graphical view]
Gene3D	G3DSA:1.10.30.10. HMG-box. 1 hit.
Pfam	PF00505. HMG_box. 1 hit. [Graphical view]
SMART	SM00398. HMG. 1 hit. [Graphical view]
PROSITE	PS50118. HMG_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
SOURCE	Search...

Entry information

Entry name

Q6P9T1_MOUSE

Accession

Primary (citable) accession number: Q6P9T1

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 19, 2010
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)