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Protein
Submitted name:

Protein Trak2

Gene

Trak2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. GABA receptor binding Source: MGI

GO - Biological processi

  1. protein O-linked glycosylation Source: Ensembl
  2. protein targeting Source: Ensembl
  3. regulation of transcription from RNA polymerase II promoter Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Trak2Imported
Submitted name:
Trafficking protein, kinesin binding 2Imported
Gene namesi
Name:Trak2Imported
Synonyms:Als2cr3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 1

Organism-specific databases

MGIiMGI:1918077. Trak2.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: MGI
  2. mitochondrion Source: Ensembl
  3. nucleus Source: MGI
  4. plasma membrane Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ6P9N8.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG246318.
GeneTreeiENSGT00390000003132.
HOGENOMiHOG000143414.
HOVERGENiHBG069248.
KOiK15374.
OMAiVGQLKMN.
OrthoDBiEOG7CRTSM.
TreeFamiTF323495.

Family and domain databases

InterProiIPR006933. HAP1_N.
IPR022154. Traffickng_kinesin-bd_prot_dom.
[Graphical view]
PfamiPF04849. HAP1_N. 1 hit.
PF12448. Milton. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6P9N8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQSQNAIFK SRTGEANLMS SNHRDSESIT DVCSNEDLPE VELVNLLEEQ
60 70 80 90 100
LPQYKLRVDS LFLYENQDWA QSSHQQQDAP ETLSPVLAEE TFRYMILGTD
110 120 130 140 150
RVEQMTKTYN DIDMVTHLLA ERDRDLELAA RIGQALLKRN HVLSEQNEAL
160 170 180 190 200
EEQLGQAFDQ VNQLQHELSK KDELLRIVSI ASEESETDSS CSTPLRFNES
210 220 230 240 250
FSLSQGLLQL DMLHEKLREL EEENMALRSK ACHIKTETFT YEEKEQQLVN
260 270 280 290 300
DCVKELRETN AQMSRMTEEL SGKSDELLRY QEEISSLLSQ IVDLQHKLKE
310 320 330 340 350
HVIEKEELRL HLQASKDAQR QLTMELHELQ DRNMECLGML HESQEEIKEL
360 370 380 390 400
RSKSGPSAHL CFSQSYGVFT GESLAAEIEG TMRKKLSLDE ESVSKQKAQQ
410 420 430 440 450
KRVFDTVKVA NDTRGRSVTF PVLLPIPGSN RSSVIMTAKP FESGVQPAED
460 470 480 490 500
KTLLSPGGST EVPGNSQPTN PPGSPEDSDL ATALHRLSLR RQNYLSEKQF
510 520 530 540 550
FAEEWERKIQ ILAEQEEEVS SCDAPTENLA SVCTDQSETT DLGSASCLRG
560 570 580 590 600
FMPEKLQIVK PLEGSQTLHH WQQLAQPNLG TILDPRPGVI TKGFTQVPKD
610 620 630 640 650
VVYHISDLEE DEEEGITFQV QQPLQLEQKP ALPTPVTGIF LPPMTSAGGP
660 670 680 690 700
GTVATSNPGK CLSFTNSTFT FTTCRILHPS DITQVTPSSG FPSLACGSSA
710 720 730 740 750
SSSSNTAVNS PAASYRLSIG ESITNRRDST ITFSSTRSLA KLLQERGISA
760 770 780 790 800
KVYHSPASEN PLLQPCPKAL ATPSTPPNSP AQSPCSSPLP FEPRVHVSEN
810 820 830 840 850
FLASRPAETF LQEMYGLRPS RAPPDVGQLK MNLVDRLKRL GIARVVKTPD
860 870 880 890 900
PQENGKSREA EMGLQKPDPA VYLNSGGSLL CGLRRNQSLP VMMGSFGAPV
910
CTTSPKMGIL KED
Length:913
Mass (Da):101,308
Last modified:July 5, 2004 - v1
Checksum:iC41DEB19BE516144
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120554 Genomic DNA. No translation available.
AC169382 Genomic DNA. No translation available.
BC060681 mRNA. Translation: AAH60681.1.
RefSeqiNP_765994.2. NM_172406.3.
UniGeneiMm.222887.

Genome annotation databases

EnsembliENSMUST00000027186; ENSMUSP00000027186; ENSMUSG00000026028.
GeneIDi70827.
KEGGimmu:70827.
UCSCiuc007bcv.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC120554 Genomic DNA. No translation available.
AC169382 Genomic DNA. No translation available.
BC060681 mRNA. Translation: AAH60681.1.
RefSeqiNP_765994.2. NM_172406.3.
UniGeneiMm.222887.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000027186; ENSMUSP00000027186; ENSMUSG00000026028.
GeneIDi70827.
KEGGimmu:70827.
UCSCiuc007bcv.2. mouse.

Organism-specific databases

CTDi66008.
MGIiMGI:1918077. Trak2.

Phylogenomic databases

eggNOGiNOG246318.
GeneTreeiENSGT00390000003132.
HOGENOMiHOG000143414.
HOVERGENiHBG069248.
KOiK15374.
OMAiVGQLKMN.
OrthoDBiEOG7CRTSM.
TreeFamiTF323495.

Miscellaneous databases

NextBioi332346.
PROiQ6P9N8.
SOURCEiSearch...

Gene expression databases

GenevestigatoriQ6P9N8.

Family and domain databases

InterProiIPR006933. HAP1_N.
IPR022154. Traffickng_kinesin-bd_prot_dom.
[Graphical view]
PfamiPF04849. HAP1_N. 1 hit.
PF12448. Milton. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6Imported.
    Tissue: BrainImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ6P9N8_MOUSE
AccessioniPrimary (citable) accession number: Q6P9N8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 29, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.