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Protein

Calcyphosin-like protein

Gene

Capsl

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Calcium bindingi52 – 63121PROSITE-ProRule annotationAdd
BLAST
Calcium bindingi88 – 99122PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Calcium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Calcyphosin-like protein
Gene namesi
Name:Capsl
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:1922818. Capsl.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 208208Calcyphosin-like proteinPRO_0000264474Add
BLAST

Proteomic databases

MaxQBiQ6P8Y1.
PaxDbiQ6P8Y1.
PRIDEiQ6P8Y1.

PTM databases

iPTMnetiQ6P8Y1.
PhosphoSiteiQ6P8Y1.

Expressioni

Gene expression databases

BgeeiQ6P8Y1.
CleanExiMM_CAPSL.
GenevisibleiQ6P8Y1. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000035663.

Structurei

3D structure databases

ProteinModelPortaliQ6P8Y1.
SMRiQ6P8Y1. Positions 14-208.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini39 – 7436EF-hand 1PROSITE-ProRule annotationAdd
BLAST
Domaini75 – 11036EF-hand 2PROSITE-ProRule annotationAdd
BLAST
Domaini111 – 14636EF-hand 3PROSITE-ProRule annotationAdd
BLAST
Domaini154 – 19138EF-hand 4PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 4 EF-hand domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0032. Eukaryota.
ENOG410XRMJ. LUCA.
GeneTreeiENSGT00390000000679.
HOGENOMiHOG000008004.
HOVERGENiHBG050808.
InParanoidiQ6P8Y1.
OMAiFDEFLIT.
OrthoDBiEOG7992SK.
PhylomeDBiQ6P8Y1.
TreeFamiTF318191.

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR029633. CAPSL.
IPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PANTHERiPTHR10891:SF551. PTHR10891:SF551. 1 hit.
PfamiPF13499. EF-hand_7. 2 hits.
[Graphical view]
SMARTiSM00054. EFh. 4 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6P8Y1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGTARHDRE MAIQSKKKLS TATDPIERLR LQCLARGSAG IKGLGRVFRI
60 70 80 90 100
MDDNNNRTLD FKEFLKGLND YAVVMEKEEA EELFQRFDRD GSGTIDFNEF
110 120 130 140 150
LLTLRPPMSR ARKEVIMKAF RKLDKTGDGV ITIEDLREVY NAKHHPKYQN
160 170 180 190 200
GEWTEEQVFR KFLDNFDSPY DKDGLVTPEE FMNYYAGVSA SIDTDVYFII

MMTTAWKL
Length:208
Mass (Da):24,115
Last modified:May 5, 2009 - v4
Checksum:i030EDE76CC92DE6D
GO

Sequence cautioni

The sequence AAH37621.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAB24601.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK006467 mRNA. Translation: BAB24601.1. Different initiation.
BC037621 mRNA. Translation: AAH37621.1. Different initiation.
BC061015 mRNA. Translation: AAH61015.2.
CCDSiCCDS37040.1.
RefSeqiNP_083617.2. NM_029341.1.
UniGeneiMm.82143.

Genome annotation databases

EnsembliENSMUST00000042360; ENSMUSP00000035663; ENSMUSG00000039676.
GeneIDi75568.
KEGGimmu:75568.
UCSCiuc007vfn.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK006467 mRNA. Translation: BAB24601.1. Different initiation.
BC037621 mRNA. Translation: AAH37621.1. Different initiation.
BC061015 mRNA. Translation: AAH61015.2.
CCDSiCCDS37040.1.
RefSeqiNP_083617.2. NM_029341.1.
UniGeneiMm.82143.

3D structure databases

ProteinModelPortaliQ6P8Y1.
SMRiQ6P8Y1. Positions 14-208.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000035663.

PTM databases

iPTMnetiQ6P8Y1.
PhosphoSiteiQ6P8Y1.

Proteomic databases

MaxQBiQ6P8Y1.
PaxDbiQ6P8Y1.
PRIDEiQ6P8Y1.

Protocols and materials databases

DNASUi75568.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000042360; ENSMUSP00000035663; ENSMUSG00000039676.
GeneIDi75568.
KEGGimmu:75568.
UCSCiuc007vfn.1. mouse.

Organism-specific databases

CTDi133690.
MGIiMGI:1922818. Capsl.

Phylogenomic databases

eggNOGiKOG0032. Eukaryota.
ENOG410XRMJ. LUCA.
GeneTreeiENSGT00390000000679.
HOGENOMiHOG000008004.
HOVERGENiHBG050808.
InParanoidiQ6P8Y1.
OMAiFDEFLIT.
OrthoDBiEOG7992SK.
PhylomeDBiQ6P8Y1.
TreeFamiTF318191.

Miscellaneous databases

PROiQ6P8Y1.
SOURCEiSearch...

Gene expression databases

BgeeiQ6P8Y1.
CleanExiMM_CAPSL.
GenevisibleiQ6P8Y1. MM.

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR029633. CAPSL.
IPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PANTHERiPTHR10891:SF551. PTHR10891:SF551. 1 hit.
PfamiPF13499. EF-hand_7. 2 hits.
[Graphical view]
SMARTiSM00054. EFh. 4 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Testis.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N-3.
    Tissue: Heart, Lung and Mammary gland.

Entry informationi

Entry nameiCAPSL_MOUSE
AccessioniPrimary (citable) accession number: Q6P8Y1
Secondary accession number(s): Q5U5X2, Q9D9U6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: May 5, 2009
Last modified: June 8, 2016
This is version 91 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.