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Q6P896 (Q6P896_XENTR) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative uncharacterized protein MGC75851 EMBL AAH61333.1
Gene names
Name:cdo1 EMBL CAJ81896.1 Xenbase XB-FEAT-998512 Xenbase XB-FEAT-998513 Xenbase XB-GENE-998513
Synonyms:MGC75851 EMBL AAH61333.1
ORF Names:TEgg124i13.1-001 EMBL CAJ81896.1
OrganismXenopus tropicalis (Western clawed frog) (Silurana tropicalis) EMBL AAH61333.1
Taxonomic identifier8364 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraMesobatrachiaPipoideaPipidaeXenopodinaeXenopusSilurana

Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q6P896 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 4E9097016538A9E1

FASTA20123,220
        10         20         30         40         50         60 
MEQTEVLKPN TLDELIQILH EIFASDKVNI EEVQAIVESY ESNPREWMKF AKFDQYRYTR 

        70         80         90        100        110        120 
NLVDEGNGKF NLMILCWGEG HGSSIHDHAN SHCFLKILQG SLKETLYEWP KKKSNTEMVK 

       130        140        150        160        170        180 
KAEGVLKLNQ CAYINDSIGL HRVENPSHTE PAVSLHLYSP PFNECHTFDQ RTGHTNSVKM 

       190        200 
TFWSKYGDRT PFAIAQSQEN N 

« Hide

References

« Hide 'large scale' references
[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo EMBL AAH61333.1.
[2]Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K., Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V., McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J., Zorn A.M.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC061333 mRNA. Translation: AAH61333.1.
CR761233 mRNA. Translation: CAJ81896.1.
RefSeqNP_989132.1. NM_203801.1.
UniGeneStr.6512.

3D structure databases

ProteinModelPortalQ6P896.
SMRQ6P896. Positions 6-191.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ6P896.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID394737.
KEGGxtr:394737.

Organism-specific databases

CTD1036.
XenbaseXB-GENE-998513. cdo1.

Phylogenomic databases

eggNOGveNOG11191.
GeneTreeENSGT00390000018226.
HOGENOMHBG380588.
HOVERGENHBG004469.
InParanoidQ6P896.
OMANDELGLH.
OrthoDBEOG4W6NWZ.

Gene expression databases

BgeeQ6P896.

Family and domain databases

InterProIPR011051. Cupin_RmlC_type.
IPR010300. Cys_dOase_I.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
Gene3DG3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.
KOK00456.
PfamPF05995. CDO_I. 1 hit.
[Graphical view]
SUPFAMSSF51182. RmlC_like_cupin. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6P896_XENTR
AccessionPrimary (citable) accession number: Q6P896
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 16, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)