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Q6P7B4 (F198B_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein FAM198B
Alternative name(s):
Expressed in nerve and epithelium during development
Gene names
Name:Fam198b
Synonyms:Ened
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length516 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Golgi apparatus membrane; Single-pass type II membrane protein By similarity.

Sequence similarities

Belongs to the FAM198 family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 516516Protein FAM198B
PRO_0000288904

Regions

Topological domain1 – 3737Cytoplasmic Potential
Transmembrane38 – 5518Helical; Signal-anchor for type II membrane protein; Potential
Topological domain56 – 516461Extracellular Potential

Amino acid modifications

Glycosylation2861N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q6P7B4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: CBF1FCD4340CBA6C

FASTA51658,206
        10         20         30         40         50         60 
MTCPDKLGQL INWFVCSLCA PRVCKLWSSR RPRTRRNLLL GTACAIYLGF LVSQVGKGSF 

        70         80         90        100        110        120 
QHGQATNRGP PNNQDIFKVP FPEIPLDGTL APPESQGNGS TLQPNVVYIT LRSKRSKPAN 

       130        140        150        160        170        180 
IRGTVKPKRR KKYAVASVAP DQEVLVRPSL IQPEVARAAD AEVPGYVQGY LTKVGERPWR 

       190        200        210        220        230        240 
MLHGPRVRGS NLQQPRAPES NIRIYSESAP SWLSKEDIRR MRLLADGEVA SILPTIFEGG 

       250        260        270        280        290        300 
TRLLMLEGST SGSVPGCGPS PCGLLKQPLD MSEVFAFHLD RILGLNRTLP SVSRKLEFIQ 

       310        320        330        340        350        360 
DGRPRPIILW DSSLVPSSNV SHSSVKITWG TYQQLLKQKC WLNGRVPRPE WGCTEVHHHE 

       370        380        390        400        410        420 
WSKMALFDFL LQIYNRLDTN CCGFRPRKED ACVQNGLRPN CEDQSSVTLA HIIQRKNDPR 

       430        440        450        460        470        480 
HLVFINNKGF FDRSEDNLNF KLLEGIREFP ESAVSVLKSQ HLRQKLLQSL FLDQVYWESQ 

       490        500        510 
GGRQGIEKLI DVIERRARIL ITYINAHGAR VLPMNE 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Prostate.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC061747 mRNA. Translation: AAH61747.1.
RefSeqNP_954536.1. NM_199105.1.
XP_006232576.1. XM_006232514.1.
UniGeneRn.20514.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000013525.

Proteomic databases

PRIDEQ6P7B4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000013524; ENSRNOP00000013525; ENSRNOG00000010183.
GeneID310540.
KEGGrno:310540.
UCSCRGD:735075. rat.

Organism-specific databases

CTD51313.
RGD735075. Fam198b.

Phylogenomic databases

eggNOGNOG44675.
GeneTreeENSGT00420000029769.
HOGENOMHOG000112372.
InParanoidQ6P7B4.
OMACPVILWD.
OrthoDBEOG76DTS4.
PhylomeDBQ6P7B4.
TreeFamTF330994.

Gene expression databases

GenevestigatorQ6P7B4.

Family and domain databases

InterProIPR029207. FAM198.
[Graphical view]
PfamPF15051. FAM198. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio662125.
PROQ6P7B4.

Entry information

Entry nameF198B_RAT
AccessionPrimary (citable) accession number: Q6P7B4
Entry history
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families