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Protein

RCC1 and BTB domain-containing protein 2

Gene

Rcbtb2

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
RCC1 and BTB domain-containing protein 2
Alternative name(s):
Chromosome condensation 1-like
Regulator of chromosome condensation and BTB domain-containing protein 2
Gene namesi
Name:Rcbtb2
Synonyms:Chc1l
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi735048 Rcbtb2

Subcellular locationi

Keywords - Cellular componenti

Cytoplasmic vesicle

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002066471 – 551RCC1 and BTB domain-containing protein 2Add BLAST551

Proteomic databases

PaxDbiQ6P798
PRIDEiQ6P798

Expressioni

Gene expression databases

BgeeiENSRNOG00000015054
GenevisibleiQ6P798 RN

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020836

Structurei

3D structure databases

ProteinModelPortaliQ6P798
SMRiQ6P798
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati64 – 115RCC1 1Sequence analysisAdd BLAST52
Repeati117 – 169RCC1 2Sequence analysisAdd BLAST53
Repeati171 – 222RCC1 3Sequence analysisAdd BLAST52
Repeati223 – 274RCC1 4Sequence analysisAdd BLAST52
Repeati276 – 326RCC1 5Sequence analysisAdd BLAST51
Repeati328 – 382RCC1 6Sequence analysisAdd BLAST55
Domaini394 – 457BTBPROSITE-ProRule annotationAdd BLAST64

Domaini

The BTB domain might play a role in targeting to acrosomal vesicles.By similarity

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG1426 Eukaryota
COG5184 LUCA
GeneTreeiENSGT00910000144029
HOGENOMiHOG000065752
HOVERGENiHBG053261
InParanoidiQ6P798
KOiK11494
OMAiGQMCSMA
PhylomeDBiQ6P798
TreeFamiTF329478

Family and domain databases

Gene3Di2.130.10.30, 2 hits
InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR009091 RCC1/BLIP-II
IPR000408 Reg_chr_condens
IPR011333 SKP1/BTB/POZ_sf
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00415 RCC1, 4 hits
PRINTSiPR00633 RCCNDNSATION
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SUPFAMiSSF50985 SSF50985, 1 hit
SSF54695 SSF54695, 1 hit
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00626 RCC1_2, 1 hit
PS50012 RCC1_3, 4 hits

Sequencei

Sequence statusi: Complete.

Q6P798-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEEVPGFYG ESGKSVQATL SSLKMLDVGK WPIFSLCSEE ELQLIRQACV
60 70 80 90 100
FGTAGNEVLY TTVNDEIFVL GTNCSGCLGV GDIQSTIEPR RLDSLTGKKI
110 120 130 140 150
ASLSYGSGPH IVLATTDGEV FTWGHNAYSQ LGNGTTNHGL VPCHISTNLS
160 170 180 190 200
NKQVIEVACG SYHSLVLTSD GEVFAWGYNN SGQVGSGSTA NQPIPRRVTG
210 220 230 240 250
CLQNKVVMSI ACGQMCSMAV VDTGEVYVWG YNGNGQLGLG SSGNQPTPCR
260 270 280 290 300
VAALQGIRVQ RVACGYAHTL VLTDEGQIYA WGANSYGQLG TGNKSNQSYP
310 320 330 340 350
TPVVVEKDRI IEIAACHSAH TSAAKSQGGH VYMWGQCRGQ SVILPHLTHF
360 370 380 390 400
CCTDDVFACF ATPAVTWRLL SVEPDDHLTV AESLKREFDN PDTADLKFLV
410 420 430 440 450
DGKYIYAHKV LLKIRCEHFR SSLEDSEDDI VEMSEFSYPV FRAFLEYLYT
460 470 480 490 500
DNISLPPEEA VGLLDLATFY SETRLKKLCQ QTIKQGICEE NAIALLSAAV
510 520 530 540 550
KYDAQDLEEF CFRFCINHLT VVTQTSGFAE MDHDLLKNFI SKASRVGAFK

N
Length:551
Mass (Da):60,123
Last modified:July 5, 2004 - v1
Checksum:iD77565DDA0C25048
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC061766 mRNA Translation: AAH61766.1
RefSeqiNP_954515.1, NM_199084.1
XP_008769067.1, XM_008770845.2
XP_008769068.1, XM_008770846.2
XP_008769069.1, XM_008770847.2
XP_008769070.1, XM_008770848.1
XP_008769071.1, XM_008770849.2
XP_008769072.1, XM_008770850.2
UniGeneiRn.8721

Genome annotation databases

EnsembliENSRNOT00000020836; ENSRNOP00000020836; ENSRNOG00000015054
ENSRNOT00000091000; ENSRNOP00000070018; ENSRNOG00000015054
GeneIDi290363
KEGGirno:290363
UCSCiRGD:735048 rat

Similar proteinsi

Entry informationi

Entry nameiRCBT2_RAT
AccessioniPrimary (citable) accession number: Q6P798
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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