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Protein
Submitted name:

Pap protein

Gene

papola

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Pap proteinImported
Gene namesi
Name:papolaImported
Synonyms:papImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-944355. papola.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ6P703.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 360PAP_centralInterPro annotationAdd BLAST343
Domaini80 – 171NTP_transf_2InterPro annotationAdd BLAST92
Domaini363 – 431PAP_RNA-bindInterPro annotationAdd BLAST69

Phylogenomic databases

HOVERGENiHBG053502.
KOiK14376.

Family and domain databases

Gene3Di3.30.70.590. 1 hit.
InterProiIPR011068. NuclTrfase_I_C.
IPR007012. PolA_pol_cen_dom.
IPR007010. PolA_pol_RNA-bd_dom.
IPR014492. PolyA_polymerase.
IPR002934. Polymerase_NTP_transf_dom.
[Graphical view]
PANTHERiPTHR10682. PTHR10682. 1 hit.
PfamiPF01909. NTP_transf_2. 1 hit.
PF04928. PAP_central. 1 hit.
PF04926. PAP_RNA-bind. 1 hit.
[Graphical view]
PIRSFiPIRSF018425. PolyA_polymerase. 1 hit.
SUPFAMiSSF55003. SSF55003. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6P703-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPFPLASQGS QQSQKTYGIT SPISLATPKD TDCTLTQKLI ETLKPYGVFE
60 70 80 90 100
EEDELQHRIL ILGKLNNLVK EWIREISELK NLPQSVIENV GGKIFTFGSY
110 120 130 140 150
RLGVHTKGAD IDALCVAPRH VDRSDFFSSF YEKLKQQEEV KDLRSVEEAF
160 170 180 190 200
VPVIKLCFDG IEIDILFARL ALQTIPEDLD LRDDSLLKNL DIRCIRSLNG
210 220 230 240 250
CRVTDEILHL VPNIDSFRLT LRAIKLWAKR HNIYSNILGF LGGVSWAMLV
260 270 280 290 300
ARTCQLYPNA IASTLVHKFF LVFSKWEWPN PVLLKQPEEC NLNLPVWDPR
310 320 330 340 350
VNPSDRYHLM PIITPAYPQQ NSTYNVSVST RAVMVEEFKQ GLAITDEILL
360 370 380 390 400
LKAEWSKLFD APNFFQKYKH YILLLASAPT EKQRLEWVGL VESKIRILVG
410 420 430 440 450
SLEKNEFITL AHVNPQSFPA PSENSEKEEF RTMWVIGLVF KKMENSENLS
460 470 480 490 500
VDLTYDIQSF TDTVYRQAIN SKMFETEMKI AAMHVKRKQL HQLLPSHVLP
510 520 530 540 550
KKKKHSVEGV KLVSLNDSSI DLSVDSDNSM SVPSPTNATR TSPLNSSGLS
560 570 580 590 600
QGNSPATPVS LSVTNTQATD VMVPQNNSTE NSGGSLNESI PETATHPAFS
610 620 630 640 650
STPRPLVTRV VSSMRLVNQV QKPVTNTVTK MPSPVAGVKR TSSPTNEESP
660 670 680 690 700
KKTKTEEDEN DSSNSTEVDE QNKLETEELK EVHSEEKSSS PVPGALPSSQ
710 720 730
RSSSTDLSDI SVLPATPIPV IKNSIKLRLN R
Length:731
Mass (Da):81,922
Last modified:July 5, 2004 - v1
Checksum:i766112231A849F8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC061931 mRNA. Translation: AAH61931.1.
RefSeqiNP_001083620.1. NM_001090151.1.
UniGeneiXl.341.

Genome annotation databases

GeneIDi399024.
KEGGixla:399024.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC061931 mRNA. Translation: AAH61931.1.
RefSeqiNP_001083620.1. NM_001090151.1.
UniGeneiXl.341.

3D structure databases

ProteinModelPortaliQ6P703.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi399024.
KEGGixla:399024.

Organism-specific databases

CTDi10914.
XenbaseiXB-GENE-944355. papola.

Phylogenomic databases

HOVERGENiHBG053502.
KOiK14376.

Family and domain databases

Gene3Di3.30.70.590. 1 hit.
InterProiIPR011068. NuclTrfase_I_C.
IPR007012. PolA_pol_cen_dom.
IPR007010. PolA_pol_RNA-bd_dom.
IPR014492. PolyA_polymerase.
IPR002934. Polymerase_NTP_transf_dom.
[Graphical view]
PANTHERiPTHR10682. PTHR10682. 1 hit.
PfamiPF01909. NTP_transf_2. 1 hit.
PF04928. PAP_central. 1 hit.
PF04926. PAP_RNA-bind. 1 hit.
[Graphical view]
PIRSFiPIRSF018425. PolyA_polymerase. 1 hit.
SUPFAMiSSF55003. SSF55003. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6P703_XENLA
AccessioniPrimary (citable) accession number: Q6P703
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 5, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.