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Q6P6R0

- LFG1_RAT

UniProt

Q6P6R0 - LFG1_RAT

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Protein
Protein lifeguard 1
Gene
Grina, Lfg1, Nmdara1
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Potential apoptotic regulator By similarity.

GO - Molecular functioni

  1. cation channel activity Source: RGD

GO - Biological processi

  1. cation transport Source: GOC
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein lifeguard 1
Alternative name(s):
Glutamate [NMDA] receptor-associated protein 1
NMDA receptor glutamate-binding subunit
Gene namesi
Name:Grina
Synonyms:Lfg1, Nmdara1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 7

Organism-specific databases

RGDi628873. Grina.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei142 – 16221Helical; Reviewed prediction
Add
BLAST
Transmembranei174 – 19421Helical; Reviewed prediction
Add
BLAST
Transmembranei205 – 22521Helical; Reviewed prediction
Add
BLAST
Transmembranei230 – 25021Helical; Reviewed prediction
Add
BLAST
Transmembranei260 – 28021Helical; Reviewed prediction
Add
BLAST
Transmembranei284 – 30421Helical; Reviewed prediction
Add
BLAST
Transmembranei323 – 34321Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 348348Protein lifeguard 1
PRO_0000314441Add
BLAST

Proteomic databases

PRIDEiQ6P6R0.

Expressioni

Gene expression databases

GenevestigatoriQ6P6R0.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000045014.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi15 – 117103Pro-rich
Add
BLAST

Sequence similaritiesi

Belongs to the BI1 family. LFG subfamily.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0670.
GeneTreeiENSGT00500000044791.
HOGENOMiHOG000060393.
HOVERGENiHBG012084.
KOiK06890.
OMAiFQPSPYG.
OrthoDBiEOG7VB2G8.

Family and domain databases

InterProiIPR006214. Bax_inhibitor_1-related.
[Graphical view]
PANTHERiPTHR23291. PTHR23291. 1 hit.
PfamiPF01027. Bax1-I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6P6R0-1 [UniParc]FASTAAdd to Basket

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MSHEKSFLVS GDSYPPPNPG YPVGPQAPMP PYVQPPYPGA PYPQAAFQPS    50
PYGQPGYPHG PGPYPQGGYP QGPYPQGGYP QGPYPQSPFP PNPYGQPPPF 100
QDPGSPQHGN YQEEGPPSYY DNQDFPSVNW DKSIRQAFIR KVFLVLTLQL 150
SVTLSTVAIF TFVGEVKGFV RANVWTYYVS YAIFFISLIV LSCCGDFRRK 200
HPWNLVALSI LTISLSYMVG MIASFYNTEA VIMAVGITTA VCFTVVIFSM 250
QTRYDFTSCM GVLLVSVVVL FIFAILCIFI RNRILEIVYA SLGALLFTCF 300
LAVDTQLLLG NKQLSLSPEE YVFAALNLYT DIINIFLYIL TIIGRAKE 348
Length:348
Mass (Da):38,594
Last modified:July 5, 2004 - v1
Checksum:iA780611FC30D2861
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC062074 mRNA. Translation: AAH62074.1.
RefSeqiNP_695220.4. NM_153308.4.
XP_006241838.1. XM_006241776.1.
UniGeneiRn.5898.

Genome annotation databases

EnsembliENSRNOT00000059599; ENSRNOP00000056356; ENSRNOG00000029941.
GeneIDi266668.
KEGGirno:266668.
UCSCiRGD:628873. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC062074 mRNA. Translation: AAH62074.1 .
RefSeqi NP_695220.4. NM_153308.4.
XP_006241838.1. XM_006241776.1.
UniGenei Rn.5898.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000045014.

Chemistry

ChEMBLi CHEMBL4129.

Proteomic databases

PRIDEi Q6P6R0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000059599 ; ENSRNOP00000056356 ; ENSRNOG00000029941 .
GeneIDi 266668.
KEGGi rno:266668.
UCSCi RGD:628873. rat.

Organism-specific databases

CTDi 2907.
RGDi 628873. Grina.

Phylogenomic databases

eggNOGi COG0670.
GeneTreei ENSGT00500000044791.
HOGENOMi HOG000060393.
HOVERGENi HBG012084.
KOi K06890.
OMAi FQPSPYG.
OrthoDBi EOG7VB2G8.

Miscellaneous databases

NextBioi 624460.
PROi Q6P6R0.

Gene expression databases

Genevestigatori Q6P6R0.

Family and domain databases

InterProi IPR006214. Bax_inhibitor_1-related.
[Graphical view ]
PANTHERi PTHR23291. PTHR23291. 1 hit.
Pfami PF01027. Bax1-I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Prostate.

Entry informationi

Entry nameiLFG1_RAT
AccessioniPrimary (citable) accession number: Q6P6R0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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