Q6P623 (Q6P623_XENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Fibrillarin EMBL AAH62511.1

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000033811

Gene names

Name:	fbl Ensembl ENSXETP00000033811 Xenbase XB-FEAT-970224 EMBL CAJ81878.1 Xenbase XB-FEAT-970225 Xenbase XB-GENE-970225
Synonyms:	MGC76139 EMBL AAH62511.1
ORF Names:	TEgg058f17.1-001 EMBL CAJ81878.1

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) EMBL AAH62511.1

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Mesobatrachia › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	325 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	rRNA processing Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: InterPro
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro methyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6P623 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: E7ACBA706244A7F1	FASTA	325	34,594
	10 20 30 40 50 60 MRPGFSPRGG RGGYGDRGGF GDRGGGRGRG GFRGRGGGGD RGGFGGRGGF GGRGGFGDRG 70 80 90 100 110 120 GFRGGFKSPG RGGPRGGRGG RGGFGAGRKV IVEPHRHEGI FICRGKEDAL VTKNLVPGES 130 140 150 160 170 180 VYGEKRISVE DGEVKTEYRA WNPFRSKIAA AILGGVDQIH IKPGAKVLYL GAASGTTVSH 190 200 210 220 230 240 VSDVVGPEGL VYAVEFSHRS GRDLINVAKK RTNIIPVIED ARHPHKYRML VGMVDVVFAD 250 260 270 280 290 300 VAQPDQTRIV ALNAHNFLKN GGHFVISIKA NCIDSTAAPE AVFAAEVKKM QQENMKPQEQ 310 320 LTLEPYERDH AVVVGIYRPP AKQKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. , Goodstein D., Graves T., Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., Rokhsar D.S. Science 328:633-636(2010) [PubMed: 20431018] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	NIH - Xenopus Gene Collection (XGC) project Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Embryo EMBL AAH62511.1.
[3]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.
[4]	Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K., Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V., McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J., Zorn A.M. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01128328 Genomic DNA. No translation available. BC062511 mRNA. Translation: AAH62511.1. CR848553 mRNA. Translation: CAJ81878.1.
RefSeq	NP_989101.1. NM_203770.1.
UniGene	Str.11075.
3D structure databases
HSSP	HSSP built from PDB template 1G8A based on UniProtKB O57811.
ProteinModelPortal	Q6P623.
SMR	Q6P623. Positions 91-319.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6P623.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000033811; ENSXETP00000033811; ENSXETG00000017830.
GeneID	394705.
KEGG	xtr:394705.
Organism-specific databases
CTD	2091.
Xenbase	XB-GENE-970225. fbl.
Phylogenomic databases
eggNOG	veNOG09052.
GeneTree	ENSGT00550000074792.
HOGENOM	HBG297404.
HOVERGEN	HBG002472.
InParanoid	Q6P623.
OMA	YERDHCI.
OrthoDB	EOG4K3KX0.
Gene expression databases
Bgee	Q6P623.
Family and domain databases
HAMAP	MF_00351. RNA_methyltransf_FlpA. [Tree]
InterPro	IPR000692. Fibrillarin. IPR020813. Fibrillarin_CS. [Graphical view]
KO	K14563.
PANTHER	PTHR10335. Fibrillarin. 1 hit.
Pfam	PF01269. Fibrillarin. 1 hit. [Graphical view]
PIRSF	PIRSF006540. Nop17p. 1 hit.
PRINTS	PR00052. FIBRILLARIN.
PROSITE	PS00566. FIBRILLARIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6P623_XENTR

Accession

Primary (citable) accession number: Q6P623

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	November 16, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)