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Q6P5S8

- Q6P5S8_HUMAN

UniProt

Q6P5S8 - Q6P5S8_HUMAN

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Protein
Submitted name:

IGK@ protein

Gene
IGK@
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei120 – 1201Sucrose; via amide nitrogenImported

Names & Taxonomyi

Protein namesi
Submitted name:
IGK@ proteinImported
Gene namesi
Name:IGK@Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PeptideAtlasiQ6P5S8.
PRIDEiQ6P5S8.

PTM databases

PhosphoSiteiQ6P5S8.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2NXYX-ray2.00C22-234[»]
2NXZX-ray2.04C22-234[»]
2NY0X-ray2.20C22-234[»]
2NY1X-ray1.99C22-234[»]
2NY2X-ray2.00C22-234[»]
2NY3X-ray2.00C22-234[»]
2NY4X-ray2.00C22-234[»]
2NY5X-ray2.50L22-234[»]
2NY6X-ray2.80C22-234[»]
ProteinModelPortaliQ6P5S8.
SMRiQ6P5S8. Positions 21-236.

Miscellaneous databases

EvolutionaryTraceiQ6P5S8.

Family & Domainsi

Keywords - Domaini

Immunoglobulin domainSAAS annotations

Phylogenomic databases

HOGENOMiHOG000059537.
HOVERGENiHBG018013.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamiPF07654. C1-set. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00407. IGc1. 1 hit.
SM00406. IGv. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 2 hits.
PS00290. IG_MHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6P5S8-1 [UniParc]FASTAAdd to Basket

« Hide

METPAQLLFL LLLWLPDTTG EIVLTQSPGT LSFSPGERAT LSCRASQTVF    50
SSHLAWYQQR PGQAPRLLIY GASSRATGIP DRFSGSGSGT DFTLTITRLE 100
PEDFAVYFCQ QYGTSPSLTF GGGTRVEIKR TVAAPSVFIF PPSDEQLKSG 150
TASVVCLLNN FYPREAKVQW KVDNALQSGN SQESVTEQDS KDSTYSLSST 200
LTLSKADYEK HKVYACEVTH QGLSSPVTKS FNRGEC 236
Length:236
Mass (Da):25,773
Last modified:July 5, 2004 - v1
Checksum:i953E37BEB4FF5F27
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC062704 mRNA. Translation: AAH62704.1.
UniGeneiHs.449609.
Hs.719895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC062704 mRNA. Translation: AAH62704.1 .
UniGenei Hs.449609.
Hs.719895.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2NXY X-ray 2.00 C 22-234 [» ]
2NXZ X-ray 2.04 C 22-234 [» ]
2NY0 X-ray 2.20 C 22-234 [» ]
2NY1 X-ray 1.99 C 22-234 [» ]
2NY2 X-ray 2.00 C 22-234 [» ]
2NY3 X-ray 2.00 C 22-234 [» ]
2NY4 X-ray 2.00 C 22-234 [» ]
2NY5 X-ray 2.50 L 22-234 [» ]
2NY6 X-ray 2.80 C 22-234 [» ]
ProteinModelPortali Q6P5S8.
SMRi Q6P5S8. Positions 21-236.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q6P5S8.

Proteomic databases

PeptideAtlasi Q6P5S8.
PRIDEi Q6P5S8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOGENOMi HOG000059537.
HOVERGENi HBG018013.

Miscellaneous databases

EvolutionaryTracei Q6P5S8.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
InterProi IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view ]
Pfami PF07654. C1-set. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view ]
SMARTi SM00407. IGc1. 1 hit.
SM00406. IGv. 1 hit.
[Graphical view ]
PROSITEi PS50835. IG_LIKE. 2 hits.
PS00290. IG_MHC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  2. Cited for: X-RAY CRYSTALLOGRAPHY (1.99 ANGSTROMS) OF 22-234 IN COMPLEX WITH SUCROSE.

Entry informationi

Entry nameiQ6P5S8_HUMAN
AccessioniPrimary (citable) accession number: Q6P5S8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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