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Q6P5S8

- Q6P5S8_HUMAN

UniProt

Q6P5S8 - Q6P5S8_HUMAN

Protein
Submitted name:

IGK@ protein

Gene

IGK@

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei120 – 1201Sucrose; via amide nitrogenImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    IGK@ proteinImported
    Gene namesi
    Name:IGK@Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PeptideAtlasiQ6P5S8.
    PRIDEiQ6P5S8.

    PTM databases

    PhosphoSiteiQ6P5S8.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2NXYX-ray2.00C22-234[»]
    2NXZX-ray2.04C22-234[»]
    2NY0X-ray2.20C22-234[»]
    2NY1X-ray1.99C22-234[»]
    2NY2X-ray2.00C22-234[»]
    2NY3X-ray2.00C22-234[»]
    2NY4X-ray2.00C22-234[»]
    2NY5X-ray2.50L22-234[»]
    2NY6X-ray2.80C22-234[»]
    ProteinModelPortaliQ6P5S8.
    SMRiQ6P5S8. Positions 21-236.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ6P5S8.

    Family & Domainsi

    Keywords - Domaini

    Immunoglobulin domainSAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000059537.
    HOVERGENiHBG018013.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    InterProiIPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR003006. Ig/MHC_CS.
    IPR003597. Ig_C1-set.
    IPR013106. Ig_V-set.
    IPR003596. Ig_V-set_subgr.
    [Graphical view]
    PfamiPF07654. C1-set. 1 hit.
    PF07686. V-set. 1 hit.
    [Graphical view]
    SMARTiSM00407. IGc1. 1 hit.
    SM00406. IGv. 1 hit.
    [Graphical view]
    PROSITEiPS50835. IG_LIKE. 2 hits.
    PS00290. IG_MHC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6P5S8-1 [UniParc]FASTAAdd to Basket

    « Hide

    METPAQLLFL LLLWLPDTTG EIVLTQSPGT LSFSPGERAT LSCRASQTVF    50
    SSHLAWYQQR PGQAPRLLIY GASSRATGIP DRFSGSGSGT DFTLTITRLE 100
    PEDFAVYFCQ QYGTSPSLTF GGGTRVEIKR TVAAPSVFIF PPSDEQLKSG 150
    TASVVCLLNN FYPREAKVQW KVDNALQSGN SQESVTEQDS KDSTYSLSST 200
    LTLSKADYEK HKVYACEVTH QGLSSPVTKS FNRGEC 236
    Length:236
    Mass (Da):25,773
    Last modified:July 5, 2004 - v1
    Checksum:i953E37BEB4FF5F27
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC062704 mRNA. Translation: AAH62704.1.
    UniGeneiHs.449609.
    Hs.719895.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC062704 mRNA. Translation: AAH62704.1 .
    UniGenei Hs.449609.
    Hs.719895.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2NXY X-ray 2.00 C 22-234 [» ]
    2NXZ X-ray 2.04 C 22-234 [» ]
    2NY0 X-ray 2.20 C 22-234 [» ]
    2NY1 X-ray 1.99 C 22-234 [» ]
    2NY2 X-ray 2.00 C 22-234 [» ]
    2NY3 X-ray 2.00 C 22-234 [» ]
    2NY4 X-ray 2.00 C 22-234 [» ]
    2NY5 X-ray 2.50 L 22-234 [» ]
    2NY6 X-ray 2.80 C 22-234 [» ]
    ProteinModelPortali Q6P5S8.
    SMRi Q6P5S8. Positions 21-236.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei Q6P5S8.

    Proteomic databases

    PeptideAtlasi Q6P5S8.
    PRIDEi Q6P5S8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOGENOMi HOG000059537.
    HOVERGENi HBG018013.

    Miscellaneous databases

    EvolutionaryTracei Q6P5S8.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    InterProi IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR003006. Ig/MHC_CS.
    IPR003597. Ig_C1-set.
    IPR013106. Ig_V-set.
    IPR003596. Ig_V-set_subgr.
    [Graphical view ]
    Pfami PF07654. C1-set. 1 hit.
    PF07686. V-set. 1 hit.
    [Graphical view ]
    SMARTi SM00407. IGc1. 1 hit.
    SM00406. IGv. 1 hit.
    [Graphical view ]
    PROSITEi PS50835. IG_LIKE. 2 hits.
    PS00290. IG_MHC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    2. Cited for: X-RAY CRYSTALLOGRAPHY (1.99 ANGSTROMS) OF 22-234.

    Entry informationi

    Entry nameiQ6P5S8_HUMAN
    AccessioniPrimary (citable) accession number: Q6P5S8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3