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Protein

60S ribosomal protein L19

Gene

rpl19

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • hemopoiesis Source: ZFIN
  • translation Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DRE-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DRE-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DRE-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-DRE-72689 Formation of a pool of free 40S subunits
R-DRE-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DRE-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DRE-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19
Gene namesi
Name:rpl19
ORF Names:zgc:77733
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 3

Organism-specific databases

ZFINiZDB-GENE-040426-2290 rpl19

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001311731 – 19660S ribosomal protein L19Add BLAST196

Proteomic databases

PaxDbiQ6P5L3
PRIDEiQ6P5L3

Expressioni

Gene expression databases

BgeeiENSDARG00000013307

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000105649

Structurei

3D structure databases

ProteinModelPortaliQ6P5L3
SMRiQ6P5L3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1696 Eukaryota
COG2147 LUCA
GeneTreeiENSGT00390000012628
HOGENOMiHOG000231277
HOVERGENiHBG056059
InParanoidiQ6P5L3
KOiK02885
OMAiNRVWIDP
OrthoDBiEOG091G0MKY
PhylomeDBiQ6P5L3
TreeFamiTF313598

Family and domain databases

CDDicd01417 Ribosomal_L19e_E, 1 hit
Gene3Di1.10.1650.10, 1 hit
HAMAPiMF_01475 Ribosomal_L19e, 1 hit
InterProiView protein in InterPro
IPR035970 60S_ribosomal_L19/L19e_sf
IPR000196 Ribosomal_L19/L19e
IPR023638 Ribosomal_L19/L19e_CS
IPR015972 Ribosomal_L19/L19e_dom1
IPR033935 Ribosomal_L19_euka
PfamiView protein in Pfam
PF01280 Ribosomal_L19e, 1 hit
SMARTiView protein in SMART
SM01416 Ribosomal_L19e, 1 hit
SUPFAMiSSF48140 SSF48140, 1 hit
PROSITEiView protein in PROSITE
PS00526 RIBOSOMAL_L19E, 1 hit

Sequencei

Sequence statusi: Complete.

Q6P5L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMLRLQKRL ASSVLRCGKK KVWLDPNETN EIANANSRQQ IRKLVKDGLI
60 70 80 90 100
IKKPVTVHSR ARCRKNTLAR RKGRHMGVGK RKGTANARMP EKLCWMRRMR
110 120 130 140 150
ILRRLLRRYR EAKKIDRHMY HSLYLRAKGN VFKNKRILME HIHKLKADKA
160 170 180 190
RKKLLADQAE ARRTKTREAR KRREERQQAK KEEIIKTLSK EDETKK
Length:196
Mass (Da):23,453
Last modified:July 5, 2004 - v1
Checksum:i8FB064826ACE2DF0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY648758 mRNA Translation: AAT68076.1
BC062844 mRNA Translation: AAH62844.1
RefSeqiNP_998373.1, NM_213208.1
UniGeneiDr.31918

Genome annotation databases

EnsembliENSDART00000121728; ENSDARP00000105649; ENSDARG00000013307
GeneIDi406489
KEGGidre:406489

Similar proteinsi

Entry informationi

Entry nameiRL19_DANRE
AccessioniPrimary (citable) accession number: Q6P5L3
Secondary accession number(s): Q6DRK1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: July 5, 2004
Last modified: March 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health