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Protein
Submitted name:

Sox3 protein

Gene

Sox3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi142 – 210HMG boxPROSITE-ProRule annotationAdd BLAST69

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Sox3 proteinImported
Gene namesi
Name:Sox3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:98365. Sox3.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

PTM / Processingi

Proteomic databases

PaxDbiQ6P564.

Structurei

3D structure databases

ProteinModelPortaliQ6P564.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini142 – 210HMG boxInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG0527. Eukaryota.
ENOG4111FVF. LUCA.
HOVERGENiHBG105663.

Family and domain databases

Gene3Di1.10.30.10. 1 hit.
InterProiView protein in InterPro
IPR009071. HMG_box_dom.
IPR022097. SOX_fam.
PfamiView protein in Pfam
PF00505. HMG_box. 1 hit.
PF12336. SOXp. 1 hit.
SMARTiView protein in SMART
SM00398. HMG. 1 hit.
SUPFAMiSSF47095. SSF47095. 1 hit.
PROSITEiView protein in PROSITE
PS50118. HMG_BOX_2. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q6P564-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PARENASGER SPRVPADFAR SPSASLPFPP ELPARRPLST TPTESPGLFT
60 70 80 90 100
VAAPAPGAPS PPATLAHLLP APAMYSLLET ELKNPVGPPT PAAGTGVPAA
110 120 130 140 150
PGAAGKSGAN PAGGANAGNG GSGGANGGGG GGGGGGSDQD RVKRPMNAFM
160 170 180 190 200
VWSRGQRRKM ALENPKMHNS EISKRLGADW KLLTDAEKRP FIDEAKRLRA
210 220 230 240 250
VHMKEYPDYK YRPRRKTKTL LKKDKYSLPG GLLPPGAAAA AAAAAAAAAA
260 270 280 290 300
SSPVGVGQRL DTYTHVNGWA NGAYSLVQEQ LGYAQPPSMS SPPPPPALPQ
310 320 330 340 350
MHRYDMAGLQ YSPMMPPGAQ SYMNAAAAAA AASGYGGMAP SAAAAAAAAY
360 370 380 390 400
GQQPATAAAA AAAAAAMSLG PMGSVVKSEP SSPPPAIASH SQRACLGDLR
410 420 430 440
DMISMYLPPG GDAADAASPL PGGRLHGVHQ HYQGAGTAVN GTVPLTHI
Length:448
Mass (Da):45,157
Last modified:July 5, 2004 - v1
Checksum:iBC567C0808CA64C9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC063061 mRNA. Translation: AAH63061.1.
UniGeneiMm.35784.

Similar proteinsi

Entry informationi

Entry nameiQ6P564_MOUSE
AccessioniPrimary (citable) accession number: Q6P564
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 27, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)