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Q6P4G7

- Q6P4G7_HUMAN

UniProt

Q6P4G7 - Q6P4G7_HUMAN

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Protein
Submitted name:

TRA@ protein

Gene

TRA@

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei13 – 131Sulfate 1
Binding sitei64 – 641Sulfate 2Imported
Binding sitei64 – 641Sulfate 3
Binding sitei86 – 861Sulfate 3

Names & Taxonomyi

Protein namesi
Submitted name:
TRA@ proteinImported
Gene namesi
Name:TRA@Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2NW2X-ray1.40A7-209[»]
4IIQX-ray2.86A6-213[»]
4L4VX-ray1.90D/G6-213[»]
4L8SX-ray2.90A6-213[»]
4L9LX-ray3.40A6-213[»]
4LCCX-ray3.26A6-213[»]
4LCWX-ray2.40D/G6-213[»]
4NQCX-ray2.50D/G6-213[»]
4NQDX-ray2.20D/G6-213[»]
4NQEX-ray2.10D/G6-213[»]
ProteinModelPortaliQ6P4G7.
SMRiQ6P4G7. Positions 7-209.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ6P4G7.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni84 – 863Sulfate 2 bindingImported

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

HOVERGENiHBG017898.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR015370. DUF1968.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamiPF09291. DUF1968. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00406. IGv. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6P4G7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGGTTGQNID QPTEMTATEG AIVQINCTYQ TSGFNGLFWY QQHAGEAPTF
60 70 80 90 100
LSYNVLDGLE EKGRFSSFLS RSKGYSYLLL KELQMKDSAS YLCAVRDASR
110 120 130 140 150
RGGGNKLTFG TGTQLKVELN IQNPDPAVYQ LRDSKSSDKS VCLFTDFDSQ
160 170 180 190 200
TNVSQSKDSD VYITDKTVLD MRSMDFKSNS AVAWSNKSDF ACANAFNNSI
210 220 230 240 250
IPEDTFFPSP ESSCDVKLVE KSFETDTNLN FQNLSVIGFR ILLLKVAGFN
260
LLMTLRLWSS
Length:260
Mass (Da):28,863
Last modified:July 5, 2004 - v1
Checksum:i582C36C443115052
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC063432 mRNA. Translation: AAH63432.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC063432 mRNA. Translation: AAH63432.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2NW2 X-ray 1.40 A 7-209 [» ]
4IIQ X-ray 2.86 A 6-213 [» ]
4L4V X-ray 1.90 D/G 6-213 [» ]
4L8S X-ray 2.90 A 6-213 [» ]
4L9L X-ray 3.40 A 6-213 [» ]
4LCC X-ray 3.26 A 6-213 [» ]
4LCW X-ray 2.40 D/G 6-213 [» ]
4NQC X-ray 2.50 D/G 6-213 [» ]
4NQD X-ray 2.20 D/G 6-213 [» ]
4NQE X-ray 2.10 D/G 6-213 [» ]
ProteinModelPortali Q6P4G7.
SMRi Q6P4G7. Positions 7-209.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOVERGENi HBG017898.

Miscellaneous databases

ChiTaRSi TRA@. human.
EvolutionaryTracei Q6P4G7.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
InterProi IPR015370. DUF1968.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view ]
Pfami PF09291. DUF1968. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view ]
SMARTi SM00406. IGv. 1 hit.
[Graphical view ]
PROSITEi PS50835. IG_LIKE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PancreasImported.
  2. "A T cell receptor flattens a bulged antigenic peptide presented by a major histocompatibility complex class I molecule."
    Tynan F.E., Reid H.H., Kjer-Nielsen L., Miles J.J., Wilce M.C., Kostenko L., Borg N.A., Williamson N.A., Beddoe T., Purcell A.W., Burrows S.R., McCluskey J., Rossjohn J.
    Nat. Immunol. 8:268-276(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 7-209.
  3. "Antigen-loaded MR1 tetramers define T cell receptor heterogeneity in mucosal-associated invariant T cells."
    Reantragoon R., Corbett A.J., Sakala I.G., Gherardin N.A., Furness J.B., Chen Z., Eckle S.B., Uldrich A.P., Birkinshaw R.W., Patel O., Kostenko L., Meehan B., Kedzierska K., Liu L., Fairlie D.P., Hansen T.H., Godfrey D.I., Rossjohn J., McCluskey J., Kjer-Nielsen L.
    J. Exp. Med. 210:2305-2320(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 6-213.
  4. "MAIT recognition of a stimulatory bacterial antigen bound to MR1."
    Lopez-Sagaseta J., Dulberger C.L., McFedries A., Cushman M., Saghatelian A., Adams E.J.
    J. Immunol. 191:5268-5277(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.90 ANGSTROMS) OF 6-213.
  5. "Recognition of vitamin B metabolites by mucosal-associated invariant T cells."
    Patel O., Kjer-Nielsen L., Le Nours J., Eckle S.B., Birkinshaw R., Beddoe T., Corbett A.J., Liu L., Miles J.J., Meehan B., Reantragoon R., Sandoval-Romero M.L., Sullivan L.C., Brooks A.G., Chen Z., Fairlie D.P., McCluskey J., Rossjohn J.
    Nat. Commun. 4:2142-2142(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 6-213.
  6. "The molecular basis for Mucosal-Associated Invariant T cell recognition of MR1 proteins."
    Lopez-Sagaseta J., Dulberger C.L., Crooks J.E., Parks C.D., Luoma A.M., McFedries A., Van Rhijn I., Saghatelian A., Adams E.J.
    Proc. Natl. Acad. Sci. U.S.A. 110:E1771-E1778(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.86 ANGSTROMS) OF 6-213.
  7. "T-cell activation by transitory neo-antigens derived from distinct microbial pathways."
    Corbett A.J., Eckle S.B., Birkinshaw R.W., Liu L., Patel O., Mahony J., Chen Z., Reantragoon R., Meehan B., Cao H., Williamson N.A., Strugnell R.A., Van Sinderen D., Mak J.Y., Fairlie D.P., Kjer-Nielsen L., Rossjohn J., McCluskey J.
    Nature 509:361-365(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 6-213.

Entry informationi

Entry nameiQ6P4G7_HUMAN
AccessioniPrimary (citable) accession number: Q6P4G7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3