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Protein
Submitted name:

Novel similar to snail homolog 2 (Drosophila) (SNAI2)

Gene

snai1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Novel similar to snail homolog 2 (Drosophila) (SNAI2)Imported
Submitted name:
Snail family zinc finger 1Imported
Submitted name:
Snail homolog 1Imported
Gene namesi
Name:snai1Imported
ORF Names:TNeu114d14.1-001Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-479970 snai1

Expressioni

Gene expression databases

BgeeiENSXETG00000027366

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000026599

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini122 – 149C2H2-typeInterPro annotationAdd BLAST28
Domaini153 – 176C2H2-typeInterPro annotationAdd BLAST24
Domaini179 – 206C2H2-typeInterPro annotationAdd BLAST28
Domaini207 – 234C2H2-typeInterPro annotationAdd BLAST28
Domaini235 – 262C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2462 Eukaryota
ENOG41106JS LUCA
GeneTreeiENSGT00390000011027
HOGENOMiHOG000261665
HOVERGENiHBG007477
KOiK05706
OMAiHCDSQAR
OrthoDBiEOG091G0Q0V
TreeFamiTF315515

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits

Sequencei

Sequence statusi: Complete.

Q6P311-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRSFLVKKH FSASKKPNYS ELESQTVYIS PFIYDKYPLP VIPQPEILTT
60 70 80 90 100
GAYYTPLVWD TSLLTTFFTS EPDYKKSPIS PSSSDDSSKP LDLTSFSSED
110 120 130 140 150
DEGGKTSDPP SPASSATEAE KFQCNQCSKS YSTFAGLSKH KQLHCDSQAR
160 170 180 190 200
KSFSCKYCEK EYVSLGALKM HIRSHTLPCV CKICGKAFSR PWLLQGHIRT
210 220 230 240 250
HTGEKPFSCT HCNRAFADRS NLRAHLQTHS DVKKYQCKNC SRTFSRMSLL
260
HKHEETGCTG AH
Length:262
Mass (Da):29,473
Last modified:July 5, 2004 - v1
Checksum:i2ACF4EB1AEDDDC4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01020045 Genomic DNA No translation available.
BC064223 mRNA Translation: AAH64223.1
CR759990 mRNA Translation: CAJ82788.1
RefSeqiNP_989267.1, NM_203936.1
UniGeneiStr.28107

Genome annotation databases

EnsembliENSXETT00000026599; ENSXETP00000026599; ENSXETG00000027366
GeneIDi394880
KEGGixtr:394880

Similar proteinsi

Entry informationi

Entry nameiQ6P311_XENTR
AccessioniPrimary (citable) accession number: Q6P311
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: February 28, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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