Q6P2V4 (Q6P2V4_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hgd protein EMBL AAH64283.1

Submitted name:
Homogentisate 1,2-dioxygenase EMBL AAI52650.1 Ensembl ENSDARP00000074936

Gene names

Name:

hgd EMBL AAH64283.1 Ensembl ENSDARP00000074936 ZFIN ZDB-GENE-020802-5

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH64283.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Dioxygenase EMBL AAI52650.1 Oxidoreductase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	L-phenylalanine catabolic process Inferred from electronic annotation. Source: InterPro tyrosine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	homogentisate 1,2-dioxygenase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6P2V4 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 2D132E483DCD3CF8	FASTA	443	49,885
	10 20 30 40 50 60 MAGLKYMSGF GNEFSSEDPR CPGSLPEGQN NPQVCPYGLY AEQLSGSAFT CPRSSNKRSW 70 80 90 100 110 120 LYRILPSVRH KPFTRMSCGD LTENWNEVEP DPNQLRWKPF NIPKSSEKKV DFVSGLHTVC 130 140 150 160 170 180 GAGDSKSRNG IAIHMYSCNT SMTDKCFQNA DGDFLIVPQQ GEILITTEFG KMMVEPNEIC 190 200 210 220 230 240 VIQQGMRFSV DVFGETRGYI LEVFGAHFEL PDLGPIGANG LANPRDFQTP VAWYEDRTIA 250 260 270 280 290 300 TGYTIVNKYQ GKLFSCQQDF SPFNVVAWHG NYAPYKYNLE NFMVINCVAF DHADPSIFTV 310 320 330 340 350 360 LTAKSTRPGV AIADFVIFPP RWGVADHTFR PPYYHRNCMS EFMGLIKGHY EAKEEGFQPG 370 380 390 400 410 420 GGSLHSIMTP HGPDVDCFEK NSTALLKPER VAEGTMAFMF ESSFSMAVTK WGLETCQRLD 430 440 KNYYKCWEAL KSHFNPNWKP SSK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis EMBL AAI52650.1.
[2]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Whole EMBL AAH64283.1.
[3]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000074936.
[4]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000074936.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX470095 Genomic DNA. No translation available. CT574587 Genomic DNA. No translation available. BC064283 mRNA. Translation: AAH64283.1. BC152649 mRNA. Translation: AAI52650.1.
IPI	IPI00504274.
RefSeq	NP_694498.2. NM_152966.2.
UniGene	Dr.3529.
3D structure databases
ProteinModelPortal	Q6P2V4.
SMR	Q6P2V4. Positions 2-437.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6P2V4.
Proteomic databases
PRIDE	Q6P2V4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000080487; ENSDARP00000074936; ENSDARG00000058005.
GeneID	259189.
KEGG	dre:259189.
Organism-specific databases
CTD	3081.
ZFIN	ZDB-GENE-020802-5. hgd.
Phylogenomic databases
eggNOG	fiNOG14677.
GeneTree	ENSGT00390000004601.
HOGENOM	HBG293508.
HOVERGEN	HBG005965.
InParanoid	Q6P2V4.
OMA	RNCMSEF.
OrthoDB	EOG4255SQ.
Gene expression databases
ArrayExpress	Q6P2V4.
Bgee	Q6P2V4.
Family and domain databases
InterPro	IPR011051. Cupin_RmlC_type. IPR005708. Homogentis_dOase. [Graphical view]
KO	K00451.
PANTHER	PTHR11056. Homogentis_dOase. 1 hit.
Pfam	PF04209. HgmA. 1 hit. [Graphical view]
SUPFAM	SSF51182. RmlC_like_cupin. 1 hit.
TIGRFAMs	TIGR01015. HmgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6P2V4_DANRE

Accession

Primary (citable) accession number: Q6P2V4

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)