Q6P296 (Q6P296_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate (Chondroitin) synthase 1 EMBL AAH64670.1

Submitted name:
Chondroitin sulfate synthase 1 Ensembl ENSDARP00000095309

Gene names

Name:	chsy1 ZFIN ZDB-GENE-030131-3127 Ensembl ENSDARP00000095309
Synonyms:	chys1 ZFIN ZDB-GENE-030131-3127

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH64670.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	801 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cartilage morphogenesis Inferred from mutant phenotype. Source: ZFIN heart morphogenesis Inferred from mutant phenotype. Source: ZFIN pectoral fin development Inferred from mutant phenotype. Source: ZFIN regulation of Notch signaling pathway Inferred from mutant phenotype. Source: ZFIN retina morphogenesis in camera-type eye Inferred from mutant phenotype. Source: ZFIN semicircular canal formation Inferred from mutant phenotype. Source: ZFIN
Cellular component	Golgi cisterna membrane Inferred from electronic annotation. Source: InterPro
Molecular function	transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6P296 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 91D63604CFDF2B99	FASTA	801	91,832
	10 20 30 40 50 60 MAGRSRRSWF SVLLGLVVGF TLASRLILPR ASELKKAGQK RRASGGGAGG CGGGGGMMMM 70 80 90 100 110 120 MKKEYGGVLM PGTEKPSVPQ SSSFLFVGVM TAQKYLNNRA VAAYRTWAKT IPGKVEFFSS 130 140 150 160 170 180 EGSDTTIPIP IVALQNVDDS YPPQKKSFMM LKYMHDHYLD QFEWFMRADD DVYIKSEKLE 190 200 210 220 230 240 SFLRSLNSSE AIFLGQTGMG ARDELGKLAL EPGENFCMGG PGVIMSREVL RRMVPHIRQC 250 260 270 280 290 300 LQEMYTTHED VEVGRCVRRF AGVQCVWSYE MQQLFYENYE PNKKGYIRDL HNSKIHRAIT 310 320 330 340 350 360 LHPNKNPPYQ YRLHSYMLSR KIAELRHRTI QLHREIVQMS RYSNTEVHRE DLQLGMPPSF 370 380 390 400 410 420 MRFHPHQREE VLEWEFLTGK YIFSSSDGQP PRRGIDSSQK MALDDIIMQV MEMINANAKT 430 440 450 460 470 480 RGRVIDFKEI QYGYRRVNPM YGAEYVLDLL LLYKKHKGKT MTVPVRRHAY LQQTFSKIQF 490 500 510 520 530 540 LEEEEMDARV LAARINQDSD SLSFLSNSLK MLVPFKLSSP GIEQHEPKEK KINILVPLAG 550 560 570 580 590 600 RYEIFLRFMA NFEKICLIPN QNVKLLILLF STDNNTERIK QIELMREYRM KYPKADMEIK 610 620 630 640 650 660 PVSGPFSRAL ALEVGSAHFT NDSLLFYCDV DLLFTPDFLT RCRGNTILGE QTYFPIIFSQ 670 680 690 700 710 720 YDPKVVYAGK VPSDNHYVFT SKTGLWRHYG FGIVCVYKGD LVKAGGFDVS IQGWGLEDVD 730 740 750 760 770 780 LFNKFVQSGI KLFRSTDTGI VHVHHPVVCD PNLDPKQYKM CLGSKASSHG STQQLAELWL 790 800 EKNNHSFRKI SNSNNESMRT E

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Embryo EMBL AAH64670.1.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000095309.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000095309.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CABZ01056561 Genomic DNA. No translation available. CU457792 Genomic DNA. No translation available. CU856378 Genomic DNA. No translation available. BC064670 mRNA. Translation: AAH64670.1.
IPI	IPI00490826.
RefSeq	NP_997843.1. NM_212678.1.
UniGene	Dr.78655.
3D structure databases
ProteinModelPortal	Q6P296.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6P296.
Protein family/group databases
CAZy	GT31. Glycosyltransferase Family 31. GT7. Glycosyltransferase Family 7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000104536; ENSDARP00000095309; ENSDARG00000079027.
GeneID	324407.
KEGG	dre:324407.
Organism-specific databases
CTD	22856.
ZFIN	ZDB-GENE-030131-3127. chsy1.
Phylogenomic databases
eggNOG	fiNOG04397.
GeneTree	ENSGT00530000062787.
HOGENOM	HBG379060.
HOVERGEN	HBG050948.
OMA	TEFLQRC.
OrthoDB	EOG43XV2V.
PhylomeDB	Q6P296.
Gene expression databases
Bgee	Q6P296.
Family and domain databases
InterPro	IPR008428. Chond_GalNAc. [Graphical view]
KO	K13499.
PANTHER	PTHR12369. CHGN. 1 hit.
Pfam	PF05679. CHGN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6P296_DANRE

Accession

Primary (citable) accession number: Q6P296

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)