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Protein
Submitted name:

LIN9 protein

Gene

LIN9

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
LIN9 proteinImported
Gene namesi
Name:LIN9Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ6P142.
PRIDEiQ6P142.

Interactioni

Protein-protein interaction databases

IntActiQ6P142. 1 interaction.
STRINGi9606.ENSP00000329102.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1019. Eukaryota.
ENOG410YA1T. LUCA.
HOGENOMiHOG000007517.
HOVERGENiHBG057743.

Family and domain databases

InterProiIPR033471. DIRP.
IPR010561. LIN-9/ALY1.
[Graphical view]
PANTHERiPTHR21689. PTHR21689. 1 hit.
PfamiPF06584. DIRP. 1 hit.
[Graphical view]
SMARTiSM01135. DIRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6P142-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GWDRVPDVAT RRGLLRPAVS GKVRGRRRPS NVGFGNCSSA KALVSLKEGS
60 70 80 90 100
LSNTWNEKYS SLQKTPVWKG RNTSSAVEMP FRNSKRSRLF SDEDDRQINT
110 120 130 140 150
RSPKRNQRVA MVPQKFTATM STPDKKASQK IGFRLRNLLK LPKAHKWCIY
160 170 180 190 200
EWFYSNIDKP LFEGDNDFCV CLKESFPNLK TRKLTRVEWG KIRRLMGKPR
210 220 230 240 250
RCSSAFFEEE RSALKQKRQK IRLLQQRKVA DVSQFKDLPD EIPLPLVIGT
260 270 280 290 300
KVTARLRGVH DGLFTGQIDA VDTLNATYRV TFDRTGLGTH TIPDYEVLSN
310 320 330 340 350
EPHETMPIAA FGQKQRPSRF FMTPPRLHYT PPLQSPIIDN DPLLGQSPWR
360 370 380 390 400
SKISGSDTET LGGFPVEFLI QVTRLSKILM IKKEHIKKLR EMNTEAEKLK
410 420 430 440 450
SYSMPISIEF QRRYATIVLE LEQLNKDLNK VLHKVQQYCY ELAPDQGLQP
460 470 480 490 500
ADQPTDMRRR CEEEAQEIVR HANSSTGQPC VENENLTDLI SRLTAILLQI
510 520 530 540 550
KCLAEGGDLN SFEFKSLTDS LNDIKSTIDA SNISCFQNNV EIHVAHIQSG
560
LSQMGNLHAF AANNTNRD
Length:568
Mass (Da):64,762
Last modified:July 5, 2004 - v1
Checksum:i0DF92F6996076135
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC065302 mRNA. Translation: AAH65302.1.
RefSeqiNP_001257339.1. NM_001270410.1.
UniGeneiHs.120817.

Genome annotation databases

GeneIDi286826.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC065302 mRNA. Translation: AAH65302.1.
RefSeqiNP_001257339.1. NM_001270410.1.
UniGeneiHs.120817.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ6P142. 1 interaction.
STRINGi9606.ENSP00000329102.

Proteomic databases

PaxDbiQ6P142.
PRIDEiQ6P142.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi286826.

Organism-specific databases

CTDi286826.

Phylogenomic databases

eggNOGiKOG1019. Eukaryota.
ENOG410YA1T. LUCA.
HOGENOMiHOG000007517.
HOVERGENiHBG057743.

Miscellaneous databases

ChiTaRSiLIN9. human.
GenomeRNAii286826.

Family and domain databases

InterProiIPR033471. DIRP.
IPR010561. LIN-9/ALY1.
[Graphical view]
PANTHERiPTHR21689. PTHR21689. 1 hit.
PfamiPF06584. DIRP. 1 hit.
[Graphical view]
SMARTiSM01135. DIRP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: UterusImported.

Entry informationi

Entry nameiQ6P142_HUMAN
AccessioniPrimary (citable) accession number: Q6P142
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 11, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.