Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ly9 protein

Gene

Ly9

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Ly9 proteinImported
Gene namesi
Name:Ly9Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:96885. Ly9.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei445 – 465HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 38Sequence analysisAdd BLAST38
ChainiPRO_500427879439 – 645Sequence analysisAdd BLAST607

Proteomic databases

PaxDbiQ6NZB6.
PeptideAtlasiQ6NZB6.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000069319.

Structurei

3D structure databases

ProteinModelPortaliQ6NZB6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini148 – 224Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST77
Domaini353 – 431Ig-like (immunoglobulin-like)InterPro annotationAdd BLAST79

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410JJ3F. Eukaryota.
ENOG410ZAYK. LUCA.
HOVERGENiHBG030765.

Family and domain databases

Gene3Di2.60.40.10. 4 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
[Graphical view]
PfamiPF13895. Ig_2. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 2 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 4 hits.
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6NZB6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DWALGPLSEN PRMSQQQIFS PILWIPLLFL LMGLGASGKE TPPTVISGML
60 70 80 90 100
GGSVTFSLNI SKDAEIEHII WNCPPKALAL VFYKKDITIL DKGYNGRLKV
110 120 130 140 150
SEDGYSLYMS NLTKSDSGSY HAQINQKNVI LTTNKEFTLH IYEKLQKPQI
160 170 180 190 200
IVESVTPSDT DSCTFTLICT VKGTKDSVQY SWTREDTHLN TYDGSHTLRV
210 220 230 240 250
SQSVCDPDLP YTCKAWNPVS QNSSQPVRIW QFCTGASRRK TAAGKTVVGI
260 270 280 290 300
LGEPVTLPLE FRATRATKNV VWVFNTSVIS QERRGAATAD SRRKPKGSEE
310 320 330 340 350
RRVRTSDQDQ SLKISQLKME DAGPYHAYVC SEASRDPSVR HFTLLVYKRL
360 370 380 390 400
EKPSVTKSPV HMMNGICEVV LTCSVDGGGN NVTYTWMPLQ NKAVMSQGKS
410 420 430 440 450
HLNVSWESGE HLPNFTCTAH NPVSNSSSQF SSGTICSGPE RNKRFWLLLL
460 470 480 490 500
LVLLLLMLIG GCFILRKKKQ CSSLATRYRQ AEVPAEIPET PTGHGQFSVL
510 520 530 540 550
SQRYKKLDMS AKTTRHQPTP TSDTSSESSA TTEEDDEKTR MHSTANSRNQ
560 570 580 590 600
VYDLVTHQDI AHALAYEGQV EYEAITPYDK VDGSMDEEDT AYIQVSLNVQ
610 620 630 640
GETPLPQKKE DSNTIYCSVQ KPKKTAQTPQ QDAESPETPT YENFT
Length:645
Mass (Da):71,884
Last modified:July 5, 2004 - v1
Checksum:i316EF183DFD510BB
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC066212 mRNA. Translation: AAH66212.1.
UniGeneiMm.560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC066212 mRNA. Translation: AAH66212.1.
UniGeneiMm.560.

3D structure databases

ProteinModelPortaliQ6NZB6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000069319.

Proteomic databases

PaxDbiQ6NZB6.
PeptideAtlasiQ6NZB6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:96885. Ly9.

Phylogenomic databases

eggNOGiENOG410JJ3F. Eukaryota.
ENOG410ZAYK. LUCA.
HOVERGENiHBG030765.

Miscellaneous databases

ChiTaRSiLy9. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di2.60.40.10. 4 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
[Graphical view]
PfamiPF13895. Ig_2. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 2 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 4 hits.
PROSITEiPS50835. IG_LIKE. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6NZB6_MOUSE
AccessioniPrimary (citable) accession number: Q6NZB6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: November 30, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.