Zgc:77836 - Danio rerio (Zebrafish)

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Unreviewed, UniProtKB/TrEMBL Q6NX01 (Q6NX01_DANRE)

Last modified December 15, 2009. Version 42. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Zgc:77836 EMBL AAH67340.1

Gene names

ORF Names:

zgc:77836 ZFIN ZDB-GENE-040426-2272

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH67340.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	619 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Pathway	Protein modification; protein glycosylation. Spearmint SPM000772
Sequence similarities	Contains 1 ricin B-type lectin domain. Spearmint SPM000772

Ontologies

Keywords
Cellular component	Golgi apparatus Spearmint SPM000772 Membrane
Domain	Transmembrane Spearmint SPM000772
Ligand	Calcium Spearmint SPM000772 Lectin Spearmint SPM000772 Manganese Spearmint SPM000772
Molecular function	Glycosyltransferase Spearmint SPM000772 RuleBase RU003687V0 Transferase
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW manganese ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q6NX01-1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 2BE083AC5C551EDC
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619

70,362

        10         20         30         40         50         60 
MRLRRRLSPL KLAIVGGTLF MLILVVLQRD VNSGALQDPW LQDLSNKKER VFEMVRGAVN 

        70         80         90        100        110        120 
NFAFQIGAPV RPSVEVQPTP DRNCPSGFYT QRELKPWIER PPENPQAPGA DGVPFQYDRM 

       130        140        150        160        170        180 
TKEEEKEKQE GMTRHCFNQF ASDRISLHRT LGDDTRPPEC VDRKFRRCPA LPTTSVIIVF 

       190        200        210        220        230        240 
HNEAWSTLLR TVYSVLHTSP AAFLKEIIMV DDASTAEHLH GKLEEYVKAL KIVKVVRQPE 

       250        260        270        280        290        300 
RKGLITARLL GASKAEGEIL TFLDAHCECF HGWLEPLLAR IVEEPTAVVS PEITTIDLNT 

       310        320        330        340        350        360 
FQFHKPVATA RAHNRGNFDW SLTFGWEGIP DYENAKRKDE TYPVKTPTFA GGLFSISKAY 

       370        380        390        400        410        420 
FEKIGTYDDK MEIWGGENVE MSFRVWQCGG QLEIIPCSVV GHVFRTKSPH TFPKGTEVIT 

       430        440        450        460        470        480 
RNQVRLAEVW MDDYKLIFYR RSQSAAKMAK EKGFGDISDR LKLREDLQCK NFSWYLSNVY 

       490        500        510        520        530        540 
PEAFVPDLSP VKFGALKNRG AQQCLDVGES NNGGKPVIMY TCHNMGGNQY FEYTSHKELR 

       550        560        570        580        590        600 
HNIGKQLCLQ ASPYPEPVKI ELCTLKGKGS SLAPEQEWLI TEEQLLKNPS SGKCLHKKGD 

       610 
KILMSPCNPD DHHQQWAFS

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Whole EMBL AAH67340.1.

Cross-references

Sequence databases
	BC067340 mRNA. Translation: AAH67340.1.
IPI	IPI00503879.
RefSeq	NP_998361.1.
UniGene	Dr.78447
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q6NX01.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Genome annotation databases
Ensembl	ENSDART00000024064; ENSDARP00000007473; ENSDARG00000014386; Danio rerio. [Genome view]
GeneID	406477.
KEGG	dre:406477.
Organism-specific databases
ZFIN	ZDB-GENE-040426-2272. zgc:77836.
Phylogenomic databases
HOGENOM	Q6NX01.
HOVERGEN	Q6NX01.
InParanoid	Q6NX01.
OMA	GTEVITR.
OrthoDB	EOG9G7FHX.
PhylomeDB	Q6NX01.
Gene expression databases
ArrayExpress	Q6NX01.
Bgee	Q6NX01.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6NX01_DANRE

Accession

Primary (citable) accession number: Q6NX01

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 15, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information