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Q6NWC1

- Q6NWC1_DANRE

UniProt

Q6NWC1 - Q6NWC1_DANRE

Protein
Submitted name:

Uncharacterized protein

Gene

vdac1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. voltage-gated anion channel activity Source: InterPro

    Enzyme and pathway databases

    ReactomeiREACT_202488. Mitochondrial protein import.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Submitted name:
    Vdac1 proteinImported
    Submitted name:
    Voltage-dependent anion channel 1Imported
    Gene namesi
    Name:vdac1Imported
    Synonyms:VDAC1Imported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 21

    Organism-specific databases

    ZFINiZDB-GENE-030131-6514. vdac1.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial outer membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi7955.ENSDARP00000066372.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG243169.
    GeneTreeiENSGT00390000011336.
    HOGENOMiHOG000188277.
    HOVERGENiHBG054036.
    InParanoidiQ6NWC1.
    KOiK05862.
    OMAiTKTENDI.
    OrthoDBiEOG7P8P8G.
    TreeFamiTF315091.

    Family and domain databases

    Gene3Di2.40.160.10. 1 hit.
    InterProiIPR023614. Porin_dom.
    IPR001925. Porin_Euk.
    IPR027246. Porin_Euk/Tom40.
    [Graphical view]
    PfamiPF01459. Porin_3. 1 hit.
    [Graphical view]
    PRINTSiPR00185. EUKARYTPORIN.
    PROSITEiPS00558. EUKARYOTIC_PORIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6NWC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVPPTYVDL GKSARDIFTK GYGFGLIKLD LKTRSENGLE FKSSGSANTE    50
    TSKVAGTLET KYKWAEHGLT FTEKWNTDNT LGTEITLEDQ LTKGLKLTFD 100
    SSFSPNTGKK SGKIKSSYQR EHINLGCDVD YDINGTAVHG ALVLGLDGWL 150
    AGYQMTFEAG RNRITQSNFA VGYKTDEFQL HTNVNDGTEF GGSIYQKVND 200
    NLETAVNLAW TAGNSNTRFG IAAKYQIDSD AAFSAKVNNS SLVGLGYTQT 250
    LKPGIKLTLS ALLDGKNINA GGHKMGLGLE FEA 283
    Length:283
    Mass (Da):30,626
    Last modified:July 5, 2004 - v1
    Checksum:i0FBFA923329C4EB3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU929234 Genomic DNA. No translation available.
    BC067647 mRNA. Translation: AAH67647.1.
    BC160655 mRNA. Translation: AAI60655.1.
    AY398429 mRNA. Translation: AAQ97862.1.
    RefSeqiNP_001001404.1. NM_001001404.1.
    UniGeneiDr.132832.

    Genome annotation databases

    EnsembliENSDART00000066373; ENSDARP00000066372; ENSDARG00000045132.
    GeneIDi334582.
    KEGGidre:334582.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU929234 Genomic DNA. No translation available.
    BC067647 mRNA. Translation: AAH67647.1 .
    BC160655 mRNA. Translation: AAI60655.1 .
    AY398429 mRNA. Translation: AAQ97862.1 .
    RefSeqi NP_001001404.1. NM_001001404.1.
    UniGenei Dr.132832.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7955.ENSDARP00000066372.

    Protocols and materials databases

    DNASUi 334582.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000066373 ; ENSDARP00000066372 ; ENSDARG00000045132 .
    GeneIDi 334582.
    KEGGi dre:334582.

    Organism-specific databases

    CTDi 7416.
    ZFINi ZDB-GENE-030131-6514. vdac1.

    Phylogenomic databases

    eggNOGi NOG243169.
    GeneTreei ENSGT00390000011336.
    HOGENOMi HOG000188277.
    HOVERGENi HBG054036.
    InParanoidi Q6NWC1.
    KOi K05862.
    OMAi TKTENDI.
    OrthoDBi EOG7P8P8G.
    TreeFami TF315091.

    Enzyme and pathway databases

    Reactomei REACT_202488. Mitochondrial protein import.

    Miscellaneous databases

    NextBioi 20810461.
    PROi Q6NWC1.

    Family and domain databases

    Gene3Di 2.40.160.10. 1 hit.
    InterProi IPR023614. Porin_dom.
    IPR001925. Porin_Euk.
    IPR027246. Porin_Euk/Tom40.
    [Graphical view ]
    Pfami PF01459. Porin_3. 1 hit.
    [Graphical view ]
    PRINTSi PR00185. EUKARYTPORIN.
    PROSITEi PS00558. EUKARYOTIC_PORIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Kidney marrowImported.
    2. NIH - Zebrafish Gene Collection (ZGC) project
      Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: EmbryoImported.
    3. NIH - Zebrafish Gene Collection (ZGC) project
      Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: KidneyImported.
    4. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.
    5. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiQ6NWC1_DANRE
    AccessioniPrimary (citable) accession number: Q6NWC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3