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Q6NWC1

- Q6NWC1_DANRE

UniProt

Q6NWC1 - Q6NWC1_DANRE

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Protein
Submitted name:

Uncharacterized protein

Gene

vdac1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. voltage-gated anion channel activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_202488. Mitochondrial protein import.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Submitted name:
Vdac1 proteinImported
Submitted name:
Voltage-dependent anion channel 1Imported
Gene namesi
Name:vdac1Imported
Synonyms:VDAC1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 21

Organism-specific databases

ZFINiZDB-GENE-030131-6514. vdac1.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrial outer membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000066372.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG243169.
GeneTreeiENSGT00390000011336.
HOGENOMiHOG000188277.
HOVERGENiHBG054036.
KOiK05862.
OMAiTKTENDI.
OrthoDBiEOG7P8P8G.
TreeFamiTF315091.

Family and domain databases

Gene3Di2.40.160.10. 1 hit.
InterProiIPR023614. Porin_dom.
IPR001925. Porin_Euk.
IPR027246. Porin_Euk/Tom40.
[Graphical view]
PfamiPF01459. Porin_3. 1 hit.
[Graphical view]
PRINTSiPR00185. EUKARYTPORIN.
PROSITEiPS00558. EUKARYOTIC_PORIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6NWC1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVPPTYVDL GKSARDIFTK GYGFGLIKLD LKTRSENGLE FKSSGSANTE
60 70 80 90 100
TSKVAGTLET KYKWAEHGLT FTEKWNTDNT LGTEITLEDQ LTKGLKLTFD
110 120 130 140 150
SSFSPNTGKK SGKIKSSYQR EHINLGCDVD YDINGTAVHG ALVLGLDGWL
160 170 180 190 200
AGYQMTFEAG RNRITQSNFA VGYKTDEFQL HTNVNDGTEF GGSIYQKVND
210 220 230 240 250
NLETAVNLAW TAGNSNTRFG IAAKYQIDSD AAFSAKVNNS SLVGLGYTQT
260 270 280
LKPGIKLTLS ALLDGKNINA GGHKMGLGLE FEA
Length:283
Mass (Da):30,626
Last modified:July 5, 2004 - v1
Checksum:i0FBFA923329C4EB3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU929234 Genomic DNA. No translation available.
BC067647 mRNA. Translation: AAH67647.1.
BC160655 mRNA. Translation: AAI60655.1.
AY398429 mRNA. Translation: AAQ97862.1.
RefSeqiNP_001001404.1. NM_001001404.1.
UniGeneiDr.132832.

Genome annotation databases

EnsembliENSDART00000066373; ENSDARP00000066372; ENSDARG00000045132.
GeneIDi334582.
KEGGidre:334582.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU929234 Genomic DNA. No translation available.
BC067647 mRNA. Translation: AAH67647.1 .
BC160655 mRNA. Translation: AAI60655.1 .
AY398429 mRNA. Translation: AAQ97862.1 .
RefSeqi NP_001001404.1. NM_001001404.1.
UniGenei Dr.132832.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7955.ENSDARP00000066372.

Protocols and materials databases

DNASUi 334582.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000066373 ; ENSDARP00000066372 ; ENSDARG00000045132 .
GeneIDi 334582.
KEGGi dre:334582.

Organism-specific databases

CTDi 7416.
ZFINi ZDB-GENE-030131-6514. vdac1.

Phylogenomic databases

eggNOGi NOG243169.
GeneTreei ENSGT00390000011336.
HOGENOMi HOG000188277.
HOVERGENi HBG054036.
KOi K05862.
OMAi TKTENDI.
OrthoDBi EOG7P8P8G.
TreeFami TF315091.

Enzyme and pathway databases

Reactomei REACT_202488. Mitochondrial protein import.

Miscellaneous databases

NextBioi 20810461.
PROi Q6NWC1.

Family and domain databases

Gene3Di 2.40.160.10. 1 hit.
InterProi IPR023614. Porin_dom.
IPR001925. Porin_Euk.
IPR027246. Porin_Euk/Tom40.
[Graphical view ]
Pfami PF01459. Porin_3. 1 hit.
[Graphical view ]
PRINTSi PR00185. EUKARYTPORIN.
PROSITEi PS00558. EUKARYOTIC_PORIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Kidney marrowImported.
  2. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EmbryoImported.
  3. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: KidneyImported.
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  5. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiQ6NWC1_DANRE
AccessioniPrimary (citable) accession number: Q6NWC1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3