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Q6NNH1 (Q6NNH1_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative uncharacterized protein At1g13520 EMBL BAF01219.1

Uncharacterized protein EMBL AEE29029.1
Gene names
Ordered Locus Names:AT1G13520 EMBL AEE29029.1, At1g13520 EMBL BAF01219.1 TAIR AT1G13520
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAR92353.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length387 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q6NNH1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: EC85CC38BFB445AA

FASTA38744,527
        10         20         30         40         50         60 
MYVTRHLSEY QRNSSDLTRS LPEGPNSGVL VIQDEESKPT CCFGNCYDGE LKGLPFPQNA 

        70         80         90        100        110        120 
KLTVTYRTGT GNDRRSYHDQ VLFIPVLDQP YYSNRYYVIK RRGKQSGGAS ASAKEEDRVP 

       130        140        150        160        170        180 
CCFCFSYVPE VKPQEADPYD IYQQFEVHQR KPSSGYYTAT SVAPNGIPPE FLKRKYWTVE 

       190        200        210        220        230        240 
YSNSQDFGLT DDAKGINTTL RSKLPNDMNT SVVVGKWYVP FIFVKERDAK DQIKSSPYYS 

       250        260        270        280        290        300 
MTLKQRWEEV YSCVNVNYNQ KGGEVVVDVD VETQVVKLEG QETISRETSG GGFVWFSVLG 

       310        320        330        340        350        360 
DERQDKKIGL GSVVVERMKW EEERFGWLNN GERSNIKRSE RFEGGSSHWK SYRCLVLIES 

       370        380 
FELKRMDGSL VLTYEFTHVD KLKSKWD 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis cDNA clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K. expand/collapse author list , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]TAIR
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT010863 mRNA. Translation: AAR24230.1.
BT011317 mRNA. Translation: AAR92353.1.
CP002684 Genomic DNA. Translation: AEE29029.1.
AK229356 mRNA. Translation: BAF01219.1.
RefSeqNP_172809.1. NM_101222.3.
UniGeneAt.42024.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT1G13520.1-P.

Protocols and materials databases

DNASU837912.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G13520.1; AT1G13520.1; AT1G13520.
GeneID837912.
KEGGath:AT1G13520.

Organism-specific databases

TAIRAT1G13520.

Phylogenomic databases

eggNOGNOG262688.
OMARCINDAK.
ProtClustDBCLSN2682021.

Gene expression databases

GenevestigatorQ6NNH1.

Family and domain databases

InterProIPR010683. DUF1262.
[Graphical view]
PfamPF06880. DUF1262. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6NNH1_ARATH
AccessionPrimary (citable) accession number: Q6NNH1
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: April 16, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)