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Q6NNH1

- Q6NNH1_ARATH

UniProt

Q6NNH1 - Q6NNH1_ARATH

Protein
Submitted name:

At1g13520

Gene

At1g13520

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    At1g13520Imported
    Submitted name:
    Putative uncharacterized protein At1g13520Imported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:At1g13520Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G13520.

    Expressioni

    Gene expression databases

    GenevestigatoriQ6NNH1.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G13520.1-P.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG262688.
    OMAiTWISATV.

    Family and domain databases

    InterProiIPR010683. DUF1262.
    [Graphical view]
    PfamiPF06880. DUF1262. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6NNH1-1 [UniParc]FASTAAdd to Basket

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    MYVTRHLSEY QRNSSDLTRS LPEGPNSGVL VIQDEESKPT CCFGNCYDGE    50
    LKGLPFPQNA KLTVTYRTGT GNDRRSYHDQ VLFIPVLDQP YYSNRYYVIK 100
    RRGKQSGGAS ASAKEEDRVP CCFCFSYVPE VKPQEADPYD IYQQFEVHQR 150
    KPSSGYYTAT SVAPNGIPPE FLKRKYWTVE YSNSQDFGLT DDAKGINTTL 200
    RSKLPNDMNT SVVVGKWYVP FIFVKERDAK DQIKSSPYYS MTLKQRWEEV 250
    YSCVNVNYNQ KGGEVVVDVD VETQVVKLEG QETISRETSG GGFVWFSVLG 300
    DERQDKKIGL GSVVVERMKW EEERFGWLNN GERSNIKRSE RFEGGSSHWK 350
    SYRCLVLIES FELKRMDGSL VLTYEFTHVD KLKSKWD 387
    Length:387
    Mass (Da):44,527
    Last modified:July 5, 2004 - v1
    Checksum:iEC85CC38BFB445AA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT010863 mRNA. Translation: AAR24230.1.
    BT011317 mRNA. Translation: AAR92353.1.
    CP002684 Genomic DNA. Translation: AEE29029.1.
    AK229356 mRNA. Translation: BAF01219.1.
    RefSeqiNP_172809.1. NM_101222.3.
    UniGeneiAt.42024.

    Genome annotation databases

    EnsemblPlantsiAT1G13520.1; AT1G13520.1; AT1G13520.
    GeneIDi837912.
    KEGGiath:AT1G13520.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT010863 mRNA. Translation: AAR24230.1 .
    BT011317 mRNA. Translation: AAR92353.1 .
    CP002684 Genomic DNA. Translation: AEE29029.1 .
    AK229356 mRNA. Translation: BAF01219.1 .
    RefSeqi NP_172809.1. NM_101222.3.
    UniGenei At.42024.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G13520.1-P.

    Protocols and materials databases

    DNASUi 837912.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G13520.1 ; AT1G13520.1 ; AT1G13520 .
    GeneIDi 837912.
    KEGGi ath:AT1G13520.

    Organism-specific databases

    TAIRi AT1G13520.

    Phylogenomic databases

    eggNOGi NOG262688.
    OMAi TWISATV.

    Gene expression databases

    Genevestigatori Q6NNH1.

    Family and domain databases

    InterProi IPR010683. DUF1262.
    [Graphical view ]
    Pfami PF06880. DUF1262. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. "Arabidopsis cDNA clones."
      Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
      Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    3. "Arabidopsis ORF clones."
      Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
      Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    4. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
      Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.
      , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
      Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    5. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    6. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ6NNH1_ARATH
    AccessioniPrimary (citable) accession number: Q6NNH1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3