Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q6NMM8 (Q6NMM8_ARATH)

Last modified December 15, 2009. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    At5g22940 EMBL AAS47635.1
Gene names
Ordered Locus Names: At5g22940 TAIR At5g22940
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglucuronoxylan biosynthetic process

Inferred from genetic interaction. Source: TAIR

   Cellular componentGolgi apparatus

Inferred from direct assay. Source: TAIR

membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6NMM8-1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 13B860CA19D1F729

FASTA46953,809
        10         20         30         40         50         60 
MSLDIKKPNI TKTKKKKTGF VVKMQLNNNR GGNKRNIFIF FFFRNYYTWI LWFCLSLYFF 

        70         80         90        100        110        120 
TSYFSVEDQS SPSSIRLLSN HKTSSSLPSR ALIESSAIKT TSIGLFTGMK IYVYDLPASY 

       130        140        150        160        170        180 
NDDWVTASDR CASHLFAAEV AIHRALLSSD VRTLDPDEAD YFFVPVYVSC NFSTSNGFPS 

       190        200        210        220        230        240 
LSHARSLLSS AVDFLSDHYP FWNRSQGSDH VFVASHDFGA CFHAMEDMAI EEGIPKFMKR 

       250        260        270        280        290        300 
SIILQTFGVK YKHPCQEVEH VVIPPYIPPE SVQKAIEKAP VNGRRDIWAF FRGKMEVNPK 

       310        320        330        340        350        360 
NISGRFYSKG VRTAILKKFG GRRRFYLNRH RFAGYRSEIV RSVFCLCPLG WAPWSPRLVE 

       370        380        390        400        410        420 
SAVLGCVPVV IADGIQLPFS ETVQWPEISL TVAEKDVRNL RKVLEHVAAT NLSAIQRNLH 

       430        440        450        460 
EPVFKRALLY NVPMKEGDAT WHILESLWRK LDDRSYRRSR VLSQREVDM 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

BT011629 mRNA. Translation: AAS47635.1.
BT014962 mRNA. Translation: AAT47813.1.
IPIIPI00539801.
RefSeqNP_197685.2.
UniGeneAt.44147

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT47. Glycosyltransferase Family 47.

Genome annotation databases

GeneID832358.
GenomeReviewsGene locus AT5G22940 in contig BA000015_GR.
KEGGath:AT5G22940.
NMPDRfig|3702.1.peg.24462.

Organism-specific databases

TAIRAt5g22940.

Phylogenomic databases

InParanoidQ6NMM8.
PhylomeDBQ6NMM8.

Gene expression databases

GenevestigatorQ6NMM8.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6NMM8_ARATH
AccessionPrimary (citable) accession number: Q6NMM8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 15, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information