Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q6NIA6 (Q6NIA6_CORDI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase I HAMAP MF_01877
EC=2.1.1.198 HAMAP MF_01877
Alternative name(s):
16S rRNA 2'-O-ribose C1402 methyltransferase HAMAP MF_01877
rRNA (cytidine-2'-O-)-methyltransferase RsmI HAMAP MF_01877
Gene names
Name:rsmI HAMAP MF_01877
Ordered Locus Names:DIP0871
OrganismCorynebacterium diphtheriae [Complete proteome] [HAMAP]
Taxonomic identifier1717 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium

Protein attributes

Sequence length291 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA By similarity. HAMAP MF_01877

Catalytic activity

S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + 2'-O-methylcytosine(1402) in 16S rRNA. HAMAP MF_01877

Subcellular location

Cytoplasm By similarity HAMAP MF_01877.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmI family. HAMAP MF_01877

Ontologies

Keywords
   Biological processrRNA processing HAMAP MF_01877
   Cellular componentCytoplasm HAMAP MF_01877
   LigandS-adenosyl-L-methionine HAMAP MF_01877
   Molecular functionMethyltransferase HAMAP MF_01877
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processenzyme-directed rRNA 2'-O-methylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionrRNA (cytosine-2'-O-)-methyltransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6NIA6 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 8BD1A976EA578E55

FASTA29131,207
        10         20         30         40         50         60 
MTDQPIIDYR FLEPLPRGII LAATPLGNIG DASPRLAQAL AQAHVVAAED TRRTRALAQA 

        70         80         90        100        110        120 
LGVEITGQVL SNFDHNEQGR AQQLVEMART HTVVVVTDAG MPIVSDPGFP LVEAAHKAGV 

       130        140        150        160        170        180 
PVTCFPGPSA VPTALALSGL HVGKFAFDGF APRKQGQRRA WLESLQQEQR AVCFFESPHR 

       190        200        210        220        230        240 
IAATLADAAE VLGAKRRAAV ARELTKTFEE VRRGGLGELA EWAAKGIKGE VSVVIEGVQH 

       250        260        270        280        290 
VQHEDVHSLV AVVEERVLAG ERLKSACGEV AAHYGVSKKQ LYDAVLESRA E

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BX248356 Genomic DNA. Translation: CAE49388.1.
RefSeqNP_939235.1. NC_002935.2.

3D structure databases

ProteinModelPortalQ6NIA6.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2648547.
GenomeReviewsGene locus DIP0871 in contig BX248353_GR.
KEGGcdi:DIP0871.
NMPDRfig|257309.1.peg.826.
PATRIC21482915. VBICorDip47633_0853.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG529058.
OMAIASDRFC.
PhylomeDBQ6NIA6.
ProtClustDBCLSK633096.

Family and domain databases

HAMAPMF_01877. 16SrRNA_methyltr_I.
[Tree]
InterProIPR000878. 4pyrrol_Mease.
IPR014777. 4pyrrole_Mease_sub1.
IPR008189. rRNA_ssu_MeTfrase_I.
[Graphical view]
Gene3DG3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
KOK07056.
PANTHERPTHR21091:SF18. PTHR21091:SF18. 1 hit.
PfamPF00590. TP_methylase. 1 hit.
[Graphical view]
PIRSFPIRSF005917. MTase_YraL. 1 hit.
SUPFAMSSF53790. Cor/por_Metransf. 1 hit.
TIGRFAMsTIGR00096. TIGR00096. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6NIA6_CORDI
AccessionPrimary (citable) accession number: Q6NIA6
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info