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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
Ordered Locus Names:DIP2236Imported
OrganismiCorynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)Imported
Taxonomic identifieri257309 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000002198 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 6022HelicalSequence analysisAdd
BLAST
Transmembranei81 – 10626HelicalSequence analysisAdd
BLAST
Transmembranei142 – 16120HelicalSequence analysisAdd
BLAST
Transmembranei173 – 19523HelicalSequence analysisAdd
BLAST
Transmembranei224 – 24522HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ6NEN6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiLDMINGF.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6NEN6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTALQAFGWE FLGTALLLLL GNGVCAVNSL RTSAGKGTGW VLIAFGWGMA
60 70 80 90 100
VFVGASVASP SGGHLNPAVT IALAIKGSTP WNLVGGYVLG QFLGAMFGAI
110 120 130 140 150
LCWLTFKQLF DANNTDENGN VTGANRTTGG IFFTGPAHNQ NGWNMVTEFI
160 170 180 190 200
GTCVLLLFIF FGPTGGDLGP MTYFAVAFVI VAIGLSLGTP TGYAINPVRD
210 220 230 240
LGPRLMYAFV LPIKDKGSAN WGYAWVPIVG PMIAAVFCGV LATVVL
Length:246
Mass (Da):25,649
Last modified:July 5, 2004 - v1
Checksum:i73BA0A7F712AD967
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX248360 Genomic DNA. Translation: CAE50760.1.
RefSeqiWP_010935686.1. NC_002935.2.

Genome annotation databases

EnsemblBacteriaiCAE50760; CAE50760; DIP2236.
GeneIDi2650032.
KEGGicdi:DIP2236.
PATRICi21485781. VBICorDip47633_2244.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX248360 Genomic DNA. Translation: CAE50760.1.
RefSeqiWP_010935686.1. NC_002935.2.

3D structure databases

ProteinModelPortaliQ6NEN6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE50760; CAE50760; DIP2236.
GeneIDi2650032.
KEGGicdi:DIP2236.
PATRICi21485781. VBICorDip47633_2244.

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiLDMINGF.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6NEN6_CORDI
AccessioniPrimary (citable) accession number: Q6NEN6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.