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Q6NDV2

- Q6NDV2_RHOPA

UniProt

Q6NDV2 - Q6NDV2_RHOPA

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Protein
DNA polymerase III subunit beta
Gene
dnaN, RPA0002
Organism
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA By similarity.UniRule annotation

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).UniRule annotationSAAS annotations

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA-directed DNA polymerase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseUniRule annotationSAAS annotations, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymerase III subunit betaUniRule annotation (EC:2.7.7.7UniRule annotation)
Gene namesi
Name:dnaNImported
Ordered Locus Names:RPA0002Imported
OrganismiRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)Imported
Taxonomic identifieri258594 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001426: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. DNA polymerase III complex Source: InterPro
  2. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi258594.RPA0002.

Structurei

3D structure databases

ProteinModelPortaliQ6NDV2.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000071791.
KOiK02338.
OMAiPENDFPD.
OrthoDBiEOG65J53F.
PhylomeDBiQ6NDV2.

Family and domain databases

InterProiIPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view]
PfamiPF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000804. DNA_pol_III_b. 1 hit.
SMARTiSM00480. POL3Bc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00663. dnan. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6NDV2-1 [UniParc]FASTAAdd to Basket

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MKVTVERAQL LKSLSHVHRV VERRNTIPIL GNVLVRAENA QLALKATDLD    50
LEVTETLPAE TATAGSTTVP AHMFYDIVRK LPDGSQIVLE SDGDRSVLAI 100
RAGRSRFTLQ TLPESDFPDL AAGEMSHAFR LPASDVKRLI DRTQFAISTE 150
ETRYYLNGIY LHTAGSPKAS SLRAVATDGH RLAQLDLTLP SGADGMPGVI 200
VPRKTVGEVQ RLIEDTEAEI GIELSTGKIR FTLGNVVLTS KLIDGTFPDY 250
GRVIPQNNDK ELLVDKKDFE AAVDRVSTIS SERGRAVKLA LSAGKLVLSV 300
TNPDSGSATE ELEVEYASDP LDIGFNSRYL LDIAAQIEGE VAVLKLADPG 350
SPTLIQDRDS KSALYVLMPM RV 372
Length:372
Mass (Da):40,401
Last modified:July 5, 2004 - v1
Checksum:iF40C763C0E1009EA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX572593 Genomic DNA. Translation: CAE25446.1.
RefSeqiNP_945358.1. NC_005296.1.

Genome annotation databases

EnsemblBacteriaiCAE25446; CAE25446; RPA0002.
GeneIDi2692805.
KEGGirpa:RPA0002.
PATRICi23284095. VBIRhoPal84835_0002.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX572593 Genomic DNA. Translation: CAE25446.1 .
RefSeqi NP_945358.1. NC_005296.1.

3D structure databases

ProteinModelPortali Q6NDV2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 258594.RPA0002.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE25446 ; CAE25446 ; RPA0002 .
GeneIDi 2692805.
KEGGi rpa:RPA0002.
PATRICi 23284095. VBIRhoPal84835_0002.

Phylogenomic databases

HOGENOMi HOG000071791.
KOi K02338.
OMAi PENDFPD.
OrthoDBi EOG65J53F.
PhylomeDBi Q6NDV2.

Family and domain databases

InterProi IPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view ]
Pfami PF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000804. DNA_pol_III_b. 1 hit.
SMARTi SM00480. POL3Bc. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00663. dnan. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-98 / CGA009.

Entry informationi

Entry nameiQ6NDV2_RHOPA
AccessioniPrimary (citable) accession number: Q6NDV2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 11, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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