ID   Q6NDM3_RHOPA            Unreviewed;       525 AA.
AC   Q6NDM3;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   27-MAR-2024, entry version 126.
DE   SubName: Full=Ubiquinone biosynthesis protein AarF, a gene required for the first monooxygenase step in CoQ biosynthesis, recently renamed ubiB {ECO:0000313|EMBL:CAE25526.1};
GN   Name=ubiB {ECO:0000313|EMBL:CAE25526.1};
GN   OrderedLocusNames=RPA0082 {ECO:0000313|EMBL:CAE25526.1};
OS   Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Rhodopseudomonas.
OX   NCBI_TaxID=258594 {ECO:0000313|EMBL:CAE25526.1, ECO:0000313|Proteomes:UP000001426};
RN   [1] {ECO:0000313|EMBL:CAE25526.1, ECO:0000313|Proteomes:UP000001426}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-98 / CGA009 {ECO:0000313|Proteomes:UP000001426};
RX   PubMed=14704707; DOI=10.1038/nbt923;
RA   Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L.,
RA   Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R.,
RA   Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H.,
RA   Gibson J., Harwood C.S.;
RT   "Complete genome sequence of the metabolically versatile photosynthetic
RT   bacterium Rhodopseudomonas palustris.";
RL   Nat. Biotechnol. 22:55-61(2004).
CC   -!- PATHWAY: Cofactor biosynthesis; ubiquinone biosynthesis [regulation].
CC       {ECO:0000256|ARBA:ARBA00005020}.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. ADCK protein
CC       kinase family. {ECO:0000256|ARBA:ARBA00009670}.
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DR   EMBL; BX572593; CAE25526.1; -; Genomic_DNA.
DR   RefSeq; WP_011155653.1; NZ_CP116810.1.
DR   AlphaFoldDB; Q6NDM3; -.
DR   STRING; 258594.RPA0082; -.
DR   GeneID; 66891083; -.
DR   eggNOG; COG0661; Bacteria.
DR   HOGENOM; CLU_006533_0_0_5; -.
DR   PhylomeDB; Q6NDM3; -.
DR   UniPathway; UPA00232; -.
DR   Proteomes; UP000001426; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004672; F:protein kinase activity; IEA:InterPro.
DR   GO; GO:0006744; P:ubiquinone biosynthetic process; IEA:UniProtKB-UniPathway.
DR   Gene3D; 1.10.510.10; Transferase(Phosphotransferase) domain 1; 1.
DR   InterPro; IPR004147; ABC1_dom.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   InterPro; IPR010232; UbiB.
DR   NCBIfam; TIGR01982; UbiB; 1.
DR   PANTHER; PTHR10566; CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED; 1.
DR   PANTHER; PTHR10566:SF129; PROTEIN KINASE UBIB-RELATED; 1.
DR   Pfam; PF03109; ABC1; 1.
DR   SUPFAM; SSF56112; Protein kinase-like (PK-like); 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PE   3: Inferred from homology;
KW   Cell inner membrane {ECO:0000256|ARBA:ARBA00022519};
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Monooxygenase {ECO:0000313|EMBL:CAE25526.1};
KW   Oxidoreductase {ECO:0000313|EMBL:CAE25526.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001426};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}; Ubiquinone {ECO:0000313|EMBL:CAE25526.1};
KW   Ubiquinone biosynthesis {ECO:0000256|ARBA:ARBA00022688}.
FT   TRANSMEM        505..522
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          122..525
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000259|PROSITE:PS50011"
SQ   SEQUENCE   525 AA;  58157 MW;  16A0464CCA5105E0 CRC64;
     MIAALTHVAR LGRAAFVFAR EGVFGVVDPA LIPPAGQVPV RLARLIERRG AKSGARLSRA
     LTRLGPAYLK LGQFLATRPD VVGVAMARDL ESLQDRLPPF SQDEAEQVIA ISLERPVRDL
     FVSLSPPVAA ASIAQVHRGE IELGGVRKQV AVKVLRPNVS ARFRRDLSDF FYVAEKAELY
     SAEARRLRLV EVINTMSRSV AMEMDLRLEA AAASEMAENT KDDPDFRVPT VDWDRTSHNV
     LTMEWIDGIP LNDHARLKEA NVDTVELGRK VIQSFLRHAL RDGFFHADMH PGNLFLDRDG
     KLVAVDFGIM GRLLPKERRF LAEILLGFIT RNYRRVAEVH FEAGYVPPHH SVENFAQAIR
     AIGEPIHNRL AEEISMAKLL TLLLEVTGLF DMRTRPELIL LQKTMVVVEG VARSFDPKLD
     IWKVADPVVR EWIQRNLGPI GKVEGALAGA GELGHTLTSL PTIVSRAVTV LNQLEVMTKD
     GLVLAPETIA AIGRTERGRT RGRTVALWVI AATFIGVLIA LSRMI
//