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Q6NDM3 (Q6NDM3_RHOPA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ubiB EMBL CAE25526.1
Ordered Locus Names:RPA0082 EMBL CAE25526.1
OrganismRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) [Complete proteome] [HAMAP] EMBL CAE25526.1
Taxonomic identifier258594 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis By similarity. SAAS SAAS004147

Pathway

Cofactor biosynthesis; ubiquinone biosynthesis [regulation]. SAAS SAAS004147

Sequence similarities

Contains protein kinase domain. SAAS SAAS004147

Sequences

Sequence LengthMass (Da)Tools
Q6NDM3 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 16A0464CCA5105E0

FASTA52558,157
        10         20         30         40         50         60 
MIAALTHVAR LGRAAFVFAR EGVFGVVDPA LIPPAGQVPV RLARLIERRG AKSGARLSRA 

        70         80         90        100        110        120 
LTRLGPAYLK LGQFLATRPD VVGVAMARDL ESLQDRLPPF SQDEAEQVIA ISLERPVRDL 

       130        140        150        160        170        180 
FVSLSPPVAA ASIAQVHRGE IELGGVRKQV AVKVLRPNVS ARFRRDLSDF FYVAEKAELY 

       190        200        210        220        230        240 
SAEARRLRLV EVINTMSRSV AMEMDLRLEA AAASEMAENT KDDPDFRVPT VDWDRTSHNV 

       250        260        270        280        290        300 
LTMEWIDGIP LNDHARLKEA NVDTVELGRK VIQSFLRHAL RDGFFHADMH PGNLFLDRDG 

       310        320        330        340        350        360 
KLVAVDFGIM GRLLPKERRF LAEILLGFIT RNYRRVAEVH FEAGYVPPHH SVENFAQAIR 

       370        380        390        400        410        420 
AIGEPIHNRL AEEISMAKLL TLLLEVTGLF DMRTRPELIL LQKTMVVVEG VARSFDPKLD 

       430        440        450        460        470        480 
IWKVADPVVR EWIQRNLGPI GKVEGALAGA GELGHTLTSL PTIVSRAVTV LNQLEVMTKD 

       490        500        510        520 
GLVLAPETIA AIGRTERGRT RGRTVALWVI AATFIGVLIA LSRMI 

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References

[1]"Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris."
Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., Harrison F.H., Gibson J., Harwood C.S.
Nat. Biotechnol. 22:55-61(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-98 / CGA009.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX572593 Genomic DNA. Translation: CAE25526.1.
RefSeqNP_945438.1. NC_005296.1.

3D structure databases

ProteinModelPortalQ6NDM3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING258594.RPA0082.

PTM databases

PhosSiteP13102180.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE25526; CAE25526; RPA0082.
GeneID2689456.
KEGGrpa:RPA0082.
PATRIC23284265. VBIRhoPal84835_0085.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000264438.
KOK03688.
OMAILLQKTM.
OrthoDBEOG61P6SS.
PhylomeDBQ6NDM3.

Enzyme and pathway databases

UniPathwayUPA00232.

Family and domain databases

InterProIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR010232. UbiB.
IPR004147. UbiB_dom.
[Graphical view]
PfamPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMSSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR01982. UbiB. 1 hit.
PROSITEPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6NDM3_RHOPA
AccessionPrimary (citable) accession number: Q6NDM3
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)